RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NDFIP2Q9NV92 336 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ATP6V1HQ9UI12 483 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PACSIN3Q9UKS6 424 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 I3L4J1 428 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 KBTBD12Q3ZCT8 623 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ZBTB41Q5SVQ8 909 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 UNQ6126/PRO20091Q6UXV3 157 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 GPD1LQ8N335 351 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TEKT5Q96M29 485 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TMEM121Q9BTD3 319 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 RNF26Q9BY78 433 aaPredicted RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 EHD4Q9H223 541 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CHMP2BQ9UQN3 213 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CAVIN2O95810 425 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 HOXB8P17481 243 aaPredicted RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 FOXC1Q12948 553 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 VWA2Q5GFL6 755 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 SEC62Q99442 399 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 ZBTB18Q99592 522 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 C3orf14Q9HBI5 128 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 LRRC4CQ9HCJ2 640 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TANC1Q9C0D5 1861 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 BTBD17A6NE02 478 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 MTSS1O43312 755 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 DDIT3P35638 169 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 AVPR1BP47901 424 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TPI1P60174 286 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CBX3Q13185 183 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 C6orf10Q5SRN2 563 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CYFIP1Q7L576 1253 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TSPAN18Q96SJ8 248 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 NIFKQ9BYG3 293 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 KCND2Q9NZV8 630 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 B4GALT7Q9UBV7 327 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PCDHA6Q9UN73 950 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PCDHA8Q9Y5H6 950 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 RBM8AQ9Y5S9 174 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 RASSF10A6NK89 507 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 EFCAB8A8MWE9 144 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ZNF746Q6NUN9 644 aaPredicted RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 RRM2BQ7LG56 351 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PGBD1Q96JS3 809 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CCDC42Q96M95 316 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 IARS2Q9NSE4 1012 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 PCDHA11Q9Y5I1 949 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ATP2C2O75185 946 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ZNF853P0CG23 659 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 BLVRAP53004 296 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 NUBP1P53384 320 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ATRNL1Q5VV63 1379 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 MAATS1Q7Z4T9 603 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 RPAINQ86UA6 219 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ATPAF2Q8N5M1 289 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ATXN2LQ8WWM7 1075 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 SPATA17Q96L03 361 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CERS4Q9HA82 394 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ERVW-1Q9UQF0 538 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 HEBP2Q9Y5Z4 205 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 NEDD8-MDP1E9PL57 170 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 KATNA1O75449 491 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ABCG1P45844 678 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CYP2J2P51589 502 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ALDH6A1Q02252 535 aaKnown RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 CXCL9Q07325 125 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TMEM62Q0P6H9 643 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CRHR2Q13324 411 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 FIGLAQ6QHK4 219 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 TMEM86AQ8N2M4 240 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 DPF1Q92782 380 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 DLG3Q92796 817 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 UCN3Q969E3 161 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CDC6Q99741 560 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 OSBPL6Q9BZF3 934 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.5□□□□□ -1.85
LPP-220ENST00000617246 NEDD4P46934 1319 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 VWA3AA6NCI4 1184 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ABCB7O75027 752 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 ZNHIT3Q15649 155 aaPredicted RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 PTCRAQ6ISU1 281 aaPredicted RBP3.5□□□□□ -1.85
LPP-220ENST00000617246 DNAJC24Q6P3W2 148 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 USP53Q70EK8 1073 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 RIOX2Q8IUF8 465 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PPM1NQ8N819 430 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 GBP5Q96PP8 586 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 DNAJC25Q9H1X3 360 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 BHMT2Q9H2M3 363 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 PSD3Q9NYI0 1048 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 CA14Q9ULX7 337 aa3.5□□□□□ -1.85
LPP-220ENST00000617246 DFNA5O60443 496 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 KCNQ4P56696 695 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 EIF4A1P60842 406 aaKnown RBP3.49□□□□□ -1.85
LPP-220ENST00000617246 SNRPFP62306 86 aaKnown RBP3.49□□□□□ -1.85
LPP-220ENST00000617246 DHX34Q14147 1143 aaKnown RBP3.49□□□□□ -1.85
LPP-220ENST00000617246 TTMPQ5BVD1 217 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 TSHZ1Q6ZSZ6 1077 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 PNPLA8Q9NP80 782 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 CYP26B1Q9NR63 512 aa3.49□□□□□ -1.85
LPP-220ENST00000617246 PNO1Q9NRX1 252 aaKnown RBP3.49□□□□□ -1.85
LPP-220ENST00000617246 DDX19AQ9NUU7 478 aaKnown RBP3.49□□□□□ -1.85
LPP-220ENST00000617246 DPP3Q9NY33 737 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms