RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 F5P12259 2224 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 GOLGA6L22H0YM25 854 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 DPYSL4O14531 572 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TNFRSF10BO14763 440 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 ZNF263O14978 683 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TADA3O75528 432 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 RTN3O95197 1032 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 GLULP15104 373 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 AVPR1AP37288 418 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 VCPP55072 806 aaKnown RBP16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 USP46P62068 366 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 CETN1Q12798 172 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 ZNF268Q14587 947 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 ARHGAP29Q52LW3 1261 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 CT47A1Q5JQC4 288 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TMEM105Q8N8V8 129 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 MAB21L3Q8N8X9 362 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 STKLD1Q8NE28 680 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 FLCNQ8NFG4 579 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TATDN2Q93075 761 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 LRRC3BQ96PB8 259 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TWNKQ96RR1 684 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 KCNK16Q96T55 309 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 NELL2Q99435 816 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 OSBPL6Q9BZF3 934 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 KIF9Q9HAQ2 790 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.42■□□□□ 0.221e-12■■■■■ 111.8
SRGAP2C-205ENST00000617209 TDP1Q9NUW8 608 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 HMGXB4Q9UGU5 601 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 RAPGEFL1Q9UHV5 662 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 NCANO14594 1321 aa16.42■□□□□ 0.22
SRGAP2C-205ENST00000617209 FAM92AA1XBS5 289 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 ARNTLO00327 626 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 AP1G2O75843 785 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 PRAMEF12O95522 483 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 GDI1P31150 447 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 GRM2Q14416 872 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 IER5LQ5T953 404 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 YAF2Q8IY57 180 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 LMO3Q8TAP4 145 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 SLC2A14Q8TDB8 520 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 BPIFB1Q8TDL5 484 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 OVCA2Q8WZ82 227 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 CYFIP2Q96F07 1278 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 TBC1D17Q9HA65 648 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 GCNT4Q9P109 453 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 COL4A2P08572 1712 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 KIF26AQ9ULI4 1882 aaPredicted RBP16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
SRGAP2C-205ENST00000617209 CACNA1HO95180 2353 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 KANSL1LA0AUZ9 987 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 ZNF840PA6NDX5 716 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 PI15O43692 258 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 USP17L7P0C7H9 530 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 CCDC130P13994 396 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 CD58P19256 250 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 TBXAS1P24557 533 aaPredicted RBP16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 YWHAQP27348 245 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 PDE6CP51160 858 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 RAD23BP54727 409 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 ORC1Q13415 861 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 CUL2Q13617 745 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 SNX30Q5VWJ9 437 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 TMEM176AQ96HP8 235 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 SMOQ99835 787 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 PNPLA8Q9NP80 782 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 HEBP1Q9NRV9 189 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 THG1LQ9NWX6 298 aaKnown RBP16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 SIT1Q9Y3P8 196 aa16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.4■□□□□ 0.22
SRGAP2C-205ENST00000617209 TRAV19A0A0A6YYK7 116 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 STK25O00506 426 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 MAN2B1O00754 1011 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 FAM200BP0CF97 657 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 TCF3P15923 654 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 HDCP19113 662 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 YWHAEP62258 255 aaKnown RBP16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 TAF10Q12962 218 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 ARHGAP17Q68EM7 881 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 C1orf228Q6PIY5 440 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 ZNF852Q6ZMS4 543 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 IRF2BP1Q8IU81 584 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 GPIHBP1Q8IV16 184 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 KIAA1958Q8N8K9 716 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
SRGAP2C-205ENST00000617209 GPT2Q8TD30 523 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms