RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 PSD4Q8NDX1 1056 aa16■□□□□ 0.15
NOP56-220ENST00000616692 PPP4R1Q8TF05 950 aa16■□□□□ 0.15
NOP56-220ENST00000616692 CHPT1Q8WUD6 406 aa16■□□□□ 0.15
NOP56-220ENST00000616692 TBC1D10AQ9BXI6 508 aa16■□□□□ 0.15
NOP56-220ENST00000616692 SP140LQ9H930 580 aa16■□□□□ 0.15
NOP56-220ENST00000616692 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
NOP56-220ENST00000616692 SLC38A7Q9NVC3 462 aa16■□□□□ 0.15
NOP56-220ENST00000616692 RABGEF1Q9UJ41 708 aa16■□□□□ 0.15
NOP56-220ENST00000616692 PRR12Q9ULL5 1215 aa16■□□□□ 0.15
NOP56-220ENST00000616692 PCDHA12Q9UN75 941 aa16■□□□□ 0.15
NOP56-220ENST00000616692 MYH1P12882 1939 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 KLHL41O60662 606 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 RSL1D1O76021 490 aaKnown RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 PRKCAP17252 672 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 CRABP2P29373 138 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 PTPN9P43378 593 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 SNX16P57768 344 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 TRIM32Q13049 653 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 DBX2Q6ZNG2 339 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 GPR141Q7Z602 305 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 RALGPS2Q86X27 583 aaPredicted RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 TICAM1Q8IUC6 712 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 ELMOD2Q8IZ81 293 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 PCYOX1LQ8NBM8 494 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 CASKIN2Q8WXE0 1202 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 LRCH3Q96II8 777 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 ECSITQ9BQ95 431 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 ALG1Q9BT22 464 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 IFT22Q9H7X7 185 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 UCKL1Q9NWZ5 548 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 DOCK3Q8IZD9 2030 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 CLOCKO15516 846 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 PLEKHA8P1O95397 391 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 CXCR2P25025 360 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 MLLT3P42568 568 aaPredicted RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 IFITM2Q01629 132 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 KDSRQ06136 332 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 IZUMO2Q6UXV1 221 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 CATSPERGQ6ZRH7 1159 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 NET1Q7Z628 596 aaPredicted RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 SHCBP1Q8NEM2 672 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 NELL1Q92832 810 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
NOP56-220ENST00000616692 BIRC8Q96P09 236 aa15.99■□□□□ 0.15
NOP56-220ENST00000616692 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 GOLGA8RI6L899 631 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 TBX10O75333 385 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 KRT36O76013 467 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 PTPREP23469 700 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 EPHB2P29323 1055 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 PSMC2P35998 433 aaKnown RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 PEX3P56589 373 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 CLUL1Q15846 466 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 UAP1Q16222 522 aaPredicted RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 ELMSAN1Q6PJG2 1045 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 MAPKAPK5Q8IW41 473 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 CCDC138Q96M89 665 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 MTMR10Q9NXD2 777 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 NCKIPSDQ9NZQ3 722 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 POU2F3Q9UKI9 436 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 FRMPD3Q5JV73 1810 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 ESYT3A0FGR9 886 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 ALX3O95076 343 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 GFPT1Q06210 699 aaPredicted RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 PDAP1Q13442 181 aaKnown RBP15.98■□□□□ 0.15
NOP56-220ENST00000616692 STK38Q15208 465 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 IDO2Q6ZQW0 420 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 DEFB123Q8N688 67 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 ZFP28Q8NHY6 868 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 PIP4K2CQ8TBX8 421 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 THAP9Q9H5L6 903 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 EHD2Q9NZN4 543 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 PFDN2Q9UHV9 154 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 POLHQ9Y253 713 aa15.98■□□□□ 0.15
NOP56-220ENST00000616692 FAM237AA0A1B0GTK4 181 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 CNMDO75829 334 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 RPL9P32969 192 aaKnown RBP15.97■□□□□ 0.15
NOP56-220ENST00000616692 PLCD1P51178 756 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 GNG2P59768 71 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 DCLRE1AQ6PJP8 1040 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 ZNF704Q6ZNC4 412 aaPredicted RBP15.97■□□□□ 0.15
NOP56-220ENST00000616692 C4orf50Q6ZRC1 276 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 LPAR1Q92633 364 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 SGF29Q96ES7 293 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 SH2D4AQ9H788 454 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 MYH7BA7E2Y1 1941 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 MYH8P13535 1937 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 PVALEFA0A1B0GWK0 134 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 HAUS5O94927 633 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 PGM3O95394 542 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 PSMG1O95456 288 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 HLA-DRAP01903 254 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 MARK3P27448 753 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 JAG1P78504 1218 aa15.97■□□□□ 0.15
NOP56-220ENST00000616692 TRAP1Q12931 704 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms