RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ANKDD1AQ495B1 522 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 PRR16Q569H4 304 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 SYCP2LQ5T4T6 812 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 KRT80Q6KB66 452 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 HPS6Q86YV9 775 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 BBS5Q8N3I7 341 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 RIN3Q8TB24 985 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 IRGQQ8WZA9 623 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 EYA3Q99504 573 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 HERC5Q9UII4 1024 aaKnown RBP10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 PCDHGB4Q9UN71 923 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 PCDHGB5Q9Y5G0 923 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 SCINQ9Y6U3 715 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 ASTN1O14525 1302 aa10.82□□□□□ -0.68
TNFAIP3-208ENST00000615468 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 TOM1L1O75674 476 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ZMPSTE24O75844 475 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 BBOX1O75936 387 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 KRT10P13645 584 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 PCYT1AP49585 367 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC5A3P53794 718 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 CHI3L2Q15782 390 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC7A5P1Q8MH63 180 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 GLIS1Q8NBF1 620 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ELMO3Q96BJ8 720 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 VPS50Q96JG6 964 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 EMSYQ7Z589 1322 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 E5RJQ4 531 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 MCF2LO15068 1137 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 HOXD13P35453 343 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 PEX6Q13608 980 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 POTEHQ6S545 545 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC47A2Q86VL8 602 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 NUDCD3Q8IVD9 361 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 HAUS8Q9BT25 410 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 TRPC7Q9HCX4 862 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SUN2Q9UH99 717 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 TBC1D30Q9Y2I9 924 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 FADS3Q9Y5Q0 445 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 DYTNA2CJ06 578 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 NOP56O00567 594 aaKnown RBP10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 COPAP53621 1224 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ARHGAP4P98171 946 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 BFSP1Q12934 665 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 PTK7Q13308 1070 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ORC2Q13416 577 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC27A3Q5K4L6 730 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC2A7Q6PXP3 512 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ZNF410Q86VK4 478 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 CLVS1Q8IUQ0 354 aaPredicted RBP10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ARHGEF19Q8IW93 802 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ARHGEF4Q9NR80 690 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 ZDHHC7Q9NXF8 308 aa10.81□□□□□ -0.68
TNFAIP3-208ENST00000615468 H0YIN7 160 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CFLARO15519 480 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 MAFGO15525 162 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CRTAMO95727 393 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 IDO1P14902 403 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ADRA2BP18089 450 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CDH2P19022 906 aaPredicted RBP10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC1A1P43005 524 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 SLC18A1P54219 525 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 BST1Q10588 318 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 RSPH3Q86UC2 560 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ATP6V0A1Q93050 837 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 E2F7Q96AV8 911 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 TMIGD2Q96BF3 282 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ALKBH8Q96BT7 664 aaKnown RBP10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 BTBD9Q96Q07 612 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ATP8B3O60423 1300 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 A0A088AWK7 358 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 IQANK1A0A1B0GTG1 560 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 KDM1AO60341 852 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 SERPINB7O75635 380 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CALCAP01258 141 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 RBP3P10745 1247 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 MSX2P35548 267 aaPredicted RBP10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ESRRGP62508 458 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 PSMD6Q15008 389 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 USP17L6PQ6QN14 398 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 ZCCHC23Q6ZST2 131 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CATSPER3Q86XQ3 398 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 TDRPQ86YL5 185 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 TTC13Q8NBP0 860 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 TSPAN14Q8NG11 270 aa10.8□□□□□ -0.68
TNFAIP3-208ENST00000615468 CD101Q93033 1021 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms