RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 EXOC2Q96KP1 924 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CEP170P1Q96L14 293 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ATP6V1G3Q96LB4 118 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FGD4Q96M96 766 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TMEM68Q96MH6 324 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TCEANC2Q96MN5 208 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 WRNIP1Q96S55 665 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 NUP88Q99567 741 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CTRCQ99895 268 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 C19orf43Q9BQ61 176 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 WACQ9BTA9 647 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MENTQ9BUN1 341 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RSRP1Q9BUV0 290 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TIPINQ9BVW5 301 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CINPQ9BW66 212 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 NIF3L1Q9GZT8 377 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LHX5Q9H2C1 402 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LIN28AQ9H9Z2 209 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ACTR10Q9NZ32 417 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DENND2AQ9ULE3 1009 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LIMCH1Q9UPQ0 1083 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HRH3Q9Y5N1 445 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DMRT1Q9Y5R6 373 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FLT1P17948 1338 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC7Q96M83 1385 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RAB3GAP2Q9H2M9 1393 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 AKAP12Q02952 1782 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FANCD2Q9BXW9 1451 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 A0A1B0GVL5 298 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZSCAN5CA6NGD5 496 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 M0R082 166 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HIP1O00291 1037 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FBP2O00757 339 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 BET1O15155 118 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PI15O43692 258 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SEC22BO75396 215 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SLITRK5O94991 958 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PLGP00747 810 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 POLR2MP0CAP2 368 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PRKAR1AP10644 381 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CYP2A6P11509 494 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RHCEP18577 417 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 KCNA5P22460 613 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 EEF1GP26641 437 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GNA11P29992 359 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 L1CAMP32004 1257 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TXLNAP40222 546 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CCR3P51677 355 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 UBE2IP63279 158 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RHDQ02161 417 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GCNT1Q02742 428 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TNP2Q05952 138 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SSRP1Q08945 709 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 KCNAB2Q13303 367 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SGCAQ16586 387 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MAPKAPK3Q16644 382 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FNDC3BQ53EP0 1204 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FBXO48Q5FWF7 155 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HABP4Q5JVS0 413 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 DGKKQ5KSL6 1271 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 RTP2Q5QGT7 225 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF468Q5VIY5 522 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TCERG1LQ5VWI1 586 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 WDR73Q6P4I2 378 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 Q6ZUG5 572 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 C8orf86Q6ZUL3 223 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 FAM47EQ6ZV65 393 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 STOX1Q6ZVD7 989 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HDXQ7Z353 690 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 KCTD20Q7Z5Y7 419 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 GATAD2AQ86YP4 633 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SLC22A9Q8IVM8 553 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CNTROBQ8N137 903 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 OR8H3Q8N146 312 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF417Q8TAU3 575 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 XAGE3Q8WTP9 111 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 WASF1Q92558 559 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LPPQ93052 612 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 C19orf60Q96EN9 201 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 HES6Q96HZ4 224 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SHDQ96IW2 340 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF560Q96MR9 790 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 WDR24Q96S15 920 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ZNF587Q96SQ5 575 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SH3GL2Q99962 352 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CITED2Q99967 270 aaPredicted RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 KIFC3Q9BVG8 833 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 TARS2Q9BW92 718 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 BTBD2Q9BX70 525 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 NT5C1AQ9BXI3 368 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 MRPL1Q9BYD6 325 aaKnown RBP3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CARD9Q9H257 536 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 SLITRK6Q9H5Y7 841 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LRRC19Q9H756 370 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 ATP13A3Q9H7F0 1226 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 JMJD4Q9H9V9 463 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 LY9Q9HBG7 655 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 COPRSQ9NQ92 184 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 PDLIM7Q9NR12 457 aa3.18□□□□□ -1.9
CBWD3-209ENST00000614377 CYP26B1Q9NR63 512 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms