RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 TNMDQ9H2S6 317 aa19.07■□□□□ 0.64
SMN2-213ENST00000614240 ZSCAN16Q9H4T2 348 aaPredicted RBP19.07■□□□□ 0.64
SMN2-213ENST00000614240 FOXD4L1Q9NU39 408 aa19.07■□□□□ 0.64
SMN2-213ENST00000614240 ACACBO00763 2458 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 LEFTY2O00292 366 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 DLATP10515 647 aaKnown RBP19.06■□□□□ 0.64
SMN2-213ENST00000614240 TCF3P15923 654 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 PFKLP17858 780 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 ASIC1P78348 528 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 C2orf27AQ580R0 203 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 MDH1BQ5I0G3 518 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 RNF43Q68DV7 783 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 TRAPPC11Q7Z392 1133 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 LIMS2Q7Z4I7 341 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 MYCBPAPQ8TBZ2 947 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 EZH1Q92800 747 aaPredicted RBP19.06■□□□□ 0.64
SMN2-213ENST00000614240 PCED1BQ96HM7 432 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 INVSQ9Y283 1065 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 MORC2Q9Y6X9 1032 aaPredicted RBP19.06■□□□□ 0.64
SMN2-213ENST00000614240 CACNA1BQ00975 2339 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 DENND4CQ5VZ89 1909 aa19.06■□□□□ 0.64
SMN2-213ENST00000614240 ATG2BQ96BY7 2078 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 PPP3CCP48454 512 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 USP46P62068 366 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 TNNC1P63316 161 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 USP39Q53GS9 565 aaKnown RBP19.05■□□□□ 0.64
SMN2-213ENST00000614240 N4BP2L1Q5TBK1 243 aaPredicted RBP19.05■□□□□ 0.64
SMN2-213ENST00000614240 TTC30AQ86WT1 665 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 CCDC127Q96BQ5 260 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 DHX58Q96C10 678 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 MRPL45Q9BRJ2 306 aaKnown RBP19.05■□□□□ 0.64
SMN2-213ENST00000614240 ANGPTL2Q9UKU9 493 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 MTMR6Q9Y217 621 aa19.05■□□□□ 0.64
SMN2-213ENST00000614240 ZNF840PA6NDX5 716 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 F8VP50 259 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 SLC9A3R1O14745 358 aaPredicted RBP19.04■□□□□ 0.64
SMN2-213ENST00000614240 SPTLC2O15270 562 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 EIF3DO15371 548 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMN2-213ENST00000614240 CLSTN1O94985 981 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 CAVIN2O95810 425 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 NASPP49321 788 aaPredicted RBP19.04■□□□□ 0.64
SMN2-213ENST00000614240 CYP2J2P51589 502 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 IFRD2Q12894 506 aaPredicted RBP19.04■□□□□ 0.64
SMN2-213ENST00000614240 TRPC3Q13507 836 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 SNRNP35Q16560 246 aaKnown RBP19.04■□□□□ 0.64
SMN2-213ENST00000614240 WDR72Q3MJ13 1102 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 TDRD10Q5VZ19 366 aaKnown RBP19.04■□□□□ 0.64
SMN2-213ENST00000614240 TCEAL6Q6IPX3 200 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 FILIP1Q7Z7B0 1213 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 CCDC33Q8N5R6 958 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 USP33Q8TEY7 942 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 TCEAL3Q969E4 200 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 SLITRK1Q96PX8 696 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 TPSD1Q9BZJ3 242 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 TRIM9Q9C026 710 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 CUEDC2Q9H467 287 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 SMPD4Q9NXE4 827 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 EPG5Q9HCE0 2579 aa19.04■□□□□ 0.64
SMN2-213ENST00000614240 OBSL1O75147 1896 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 STX6O43752 255 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 CST3P01034 146 aaPredicted RBP19.03■□□□□ 0.64
SMN2-213ENST00000614240 PTPN1P18031 435 aaKnown RBP19.03■□□□□ 0.64
SMN2-213ENST00000614240 OPRD1P41143 372 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 SLC7A9P82251 487 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 FAM26FQ5R3K3 315 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 ANO7Q6IWH7 933 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 C11orf74Q86VG3 221 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 NELFCDQ8IXH7 590 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 IQUBQ8NA54 791 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 LINC00301Q8NCQ3 95 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 INTS4Q96HW7 963 aaKnown RBP19.03■□□□□ 0.64
SMN2-213ENST00000614240 C8orf48Q96LL4 319 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 ZNF396Q96N95 335 aaPredicted RBP19.03■□□□□ 0.64
SMN2-213ENST00000614240 CGRRF1Q99675 332 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 TTLL2Q9BWV7 592 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 RNF38Q9H0F5 515 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 AGPAT3Q9NRZ7 376 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 KBTBD4Q9NVX7 518 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 CIZ1Q9ULV3 898 aaPredicted RBP19.03■□□□□ 0.64
SMN2-213ENST00000614240 CPQQ9Y646 472 aa19.03■□□□□ 0.64
SMN2-213ENST00000614240 BCLAF3A2AJT9 711 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 A8MXQ7 604 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 K7EQS6 105 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 SCAMP3O14828 347 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 TM4SF5O14894 197 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 CLIC2O15247 247 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 PHACTR2O75167 634 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 TACC1O75410 805 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 MBL2P11226 248 aaPredicted RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 HOXD13P35453 343 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 NOP14P78316 857 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 ZXDBP98169 803 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 TAF10Q12962 218 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 PSMD6Q15008 389 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 XXYLT1Q8NBI6 393 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 ZNF507Q8TCN5 953 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 EDEM2Q9BV94 578 aa19.02■□□□□ 0.64
SMN2-213ENST00000614240 LSM14BQ9BX40 385 aaKnown RBP19.02■□□□□ 0.64
SMN2-213ENST00000614240 ELOVL4Q9GZR5 314 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms