RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 SYT15Q9BQS2 421 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 KIF9Q9HAQ2 790 aa23.22■■□□□ 1.31
CBWD1-223ENST00000613988 SMG5Q9UPR3 1016 aaKnown RBP23.22■■□□□ 1.31
CBWD1-223ENST00000613988 KIF26AQ9ULI4 1882 aaPredicted RBP23.22■■□□□ 1.31
CBWD1-223ENST00000613988 OBSL1O75147 1896 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 CST3P01034 146 aaPredicted RBP23.21■■□□□ 1.31
CBWD1-223ENST00000613988 PDGFRBP09619 1106 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 PSMC1P62191 440 aaKnown RBP23.21■■□□□ 1.31
CBWD1-223ENST00000613988 CYP24A1Q07973 514 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 PSMD2Q13200 908 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 PSMD6Q15008 389 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 WDR44Q5JSH3 913 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 CC2D1AQ6P1N0 951 aaPredicted RBP23.21■■□□□ 1.31
CBWD1-223ENST00000613988 CGRRF1Q99675 332 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 TRPC7Q9HCX4 862 aa23.21■■□□□ 1.31
CBWD1-223ENST00000613988 WARSP23381 471 aaKnown RBP23.2■■□□□ 1.3
CBWD1-223ENST00000613988 MAGEA11P43364 429 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 TPM4P67936 248 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 RUNX3Q13761 415 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 MAPRE1Q15691 268 aaKnown RBP23.2■■□□□ 1.3
CBWD1-223ENST00000613988 COBLL1Q53SF7 1204 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 TRIM68Q6AZZ1 485 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 Q6ZS52 159 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 MYLPFQ96A32 169 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 EBF3Q9H4W6 596 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 CRTAC1Q9NQ79 661 aa23.2■■□□□ 1.3
CBWD1-223ENST00000613988 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
CBWD1-223ENST00000613988 TADA3O75528 432 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 GNL1P36915 607 aaPredicted RBP23.19■■□□□ 1.3
CBWD1-223ENST00000613988 MYL5Q02045 173 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 CYP27A1Q02318 531 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 STIM1Q13586 685 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 CCINQ13939 588 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 ZNF268Q14587 947 aaPredicted RBP23.19■■□□□ 1.3
CBWD1-223ENST00000613988 KNOP1Q1ED39 458 aaKnown RBP23.19■■□□□ 1.3
CBWD1-223ENST00000613988 BMT2Q1RMZ1 405 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 ERMP1Q7Z2K6 904 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 SYNPOQ8N3V7 929 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 AOPEPQ8N6M6 819 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 RMDN1Q96DB5 314 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 CYP2S1Q96SQ9 504 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 SNX25Q9H3E2 840 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 HPS4Q9NQG7 708 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 DNAH14Q0VDD8 3507 aa23.19■■□□□ 1.3
CBWD1-223ENST00000613988 TRAV19A0A0A6YYK7 116 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 PPP1R3GB7ZBB8 358 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 USP17L7P0C7H9 530 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 BDNFP23560 247 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 GRIK1P39086 918 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 TRPC3Q13507 836 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 WDR72Q3MJ13 1102 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 VSTM1Q6UX27 236 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 TTC16Q8NEE8 873 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 ENOX1Q8TC92 643 aaKnown RBP23.18■■□□□ 1.3
CBWD1-223ENST00000613988 MRPL45Q9BRJ2 306 aaKnown RBP23.18■■□□□ 1.3
CBWD1-223ENST00000613988 RAB23Q9ULC3 237 aa23.18■■□□□ 1.3
CBWD1-223ENST00000613988 EXOC3O60645 756 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 CKMP06732 381 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 TNNC1P63316 161 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 AMPD2Q01433 879 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 C12orf56Q8IXR9 622 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 GPR161Q8N6U8 529 aaKnown RBP23.17■■□□□ 1.3
CBWD1-223ENST00000613988 OR6B3Q8NGW1 331 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 RIN3Q8TB24 985 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 MYCBPAPQ8TBZ2 947 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 ZNF516Q92618 1163 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 SPATA17Q96L03 361 aa23.17■■□□□ 1.3
CBWD1-223ENST00000613988 OTOL1A6NHN0 477 aaPredicted RBP23.16■■□□□ 1.3
CBWD1-223ENST00000613988 CHURC1-FNTBB4DL54 471 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 TACC1O75410 805 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 PAPSS2O95340 614 aaPredicted RBP23.16■■□□□ 1.3
CBWD1-223ENST00000613988 FAM163BP0C2L3 166 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 ANXA13P27216 316 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 FNTBP49356 437 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 GRSF1Q12849 480 aaKnown RBP eCLIP23.16■■□□□ 1.3
CBWD1-223ENST00000613988 PDGFRLQ15198 375 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 MDH1BQ5I0G3 518 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 GOLGA5Q8TBA6 731 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 PCED1BQ96HM7 432 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 CEP295NLQ96MC4 621 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 SLC22A12Q96S37 553 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 GMEB2Q9UKD1 530 aa23.16■■□□□ 1.3
CBWD1-223ENST00000613988 K7ESF4 209 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 PHACTR2O75167 634 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 ARSAP15289 507 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 MYL6P60660 151 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 DMWDQ09019 674 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 MTF1Q14872 753 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 NCAPHQ15003 741 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 LPAL2Q16609 132 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 DENND5BQ6ZUT9 1274 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 ARL14EPQ8N8R7 260 aaPredicted RBP23.15■■□□□ 1.3
CBWD1-223ENST00000613988 DHTKD1Q96HY7 919 aaPredicted RBP23.15■■□□□ 1.3
CBWD1-223ENST00000613988 C2orf42Q9NWW7 574 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 DUS2Q9NX74 493 aaKnown RBP23.15■■□□□ 1.3
CBWD1-223ENST00000613988 NXF1Q9UBU9 619 aaKnown RBP23.15■■□□□ 1.3
CBWD1-223ENST00000613988 CEP250Q9BV73 2442 aa23.15■■□□□ 1.3
CBWD1-223ENST00000613988 TRDMT1O14717 391 aaKnown RBP23.14■■□□□ 1.3
CBWD1-223ENST00000613988 TRIM66O15016 1216 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 CD44P16070 742 aaKnown RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms