RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CBWD1Q9BRT8 395 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 SCNM1Q9BWG6 230 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 MTMR12Q9C0I1 747 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 PPP4R2Q9NY27 417 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 RBAKQ9NYW8 714 aaPredicted RBP25.11■■□□□ 1.61
MMP28-203ENST00000612672 NME7Q9Y5B8 376 aa25.11■■□□□ 1.61
MMP28-203ENST00000612672 CELSR3Q9NYQ7 3312 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 FASNP49327 2511 aaKnown RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 MYMKA6NI61 221 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 H3BQV1 296 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 LEFTY2O00292 366 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 HDCP19113 662 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 CSRP1P21291 193 aaKnown RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 DDIT3P35638 169 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 SLC6A11P48066 632 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 DHPSP49366 369 aaPredicted RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 KCNB1Q14721 858 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 CRY1Q16526 586 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 UAP1L1Q3KQV9 507 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 L1TD1Q5T7N2 865 aaKnown RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 KIAA1211LQ6NV74 962 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 LIMS2Q7Z4I7 341 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 PIGKQ92643 395 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 EXOC4Q96A65 974 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 TMX3Q96JJ7 454 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 FNBP1Q96RU3 617 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 PDE11AQ9HCR9 933 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 TMEM74BQ9NUR3 256 aa25.1■■□□□ 1.61
MMP28-203ENST00000612672 MBD1Q9UIS9 605 aaPredicted RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 ANKRD11Q6UB99 2663 aaPredicted RBP25.1■■□□□ 1.61
MMP28-203ENST00000612672 NFATC1O95644 943 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 CEACAM1P13688 526 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 MAGEA11P43364 429 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 COL9A2Q14055 689 aaPredicted RBP25.09■■□□□ 1.61
MMP28-203ENST00000612672 ARMCX6Q7L4S7 300 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 FILIP1Q7Z7B0 1213 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 TTC30AQ86WT1 665 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 ALLCQ8N6M5 410 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 TOP6BLQ8N6T0 577 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 KRI1Q8N9T8 703 aaKnown RBP25.09■■□□□ 1.61
MMP28-203ENST00000612672 FUBP3Q96I24 572 aaKnown RBP eCLIP25.09■■□□□ 1.61
MMP28-203ENST00000612672 RNF38Q9H0F5 515 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 ITGA11Q9UKX5 1188 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 KIF3AQ9Y496 699 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 PCDH15Q96QU1 1955 aa25.09■■□□□ 1.61
MMP28-203ENST00000612672 ATXN2Q99700 1313 aaKnown RBP25.09■■□□□ 1.61
MMP28-203ENST00000612672 SGK1O00141 431 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 EIF5BO60841 1220 aaKnown RBP25.08■■□□□ 1.61
MMP28-203ENST00000612672 KRT19P08727 400 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 BDNFP23560 247 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 PTGER3P43115 390 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 POSTNQ15063 836 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 SF3A1Q15459 793 aaKnown RBP25.08■■□□□ 1.61
MMP28-203ENST00000612672 EMC10Q5UCC4 262 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 OR5B17Q8NGF7 314 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 SYT15Q9BQS2 421 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 PCIF1Q9H4Z3 704 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 MRPL44Q9H9J2 332 aaKnown RBP25.08■■□□□ 1.61
MMP28-203ENST00000612672 FSCN3Q9NQT6 498 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 TMEM30AQ9NV96 361 aa25.08■■□□□ 1.61
MMP28-203ENST00000612672 P2RY2P41231 377 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 CACNA2D1P54289 1103 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 NR1H3Q13133 447 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 C8orf34Q49A92 452 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 IL17RCQ8NAC3 791 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 TXNDC5Q8NBS9 432 aaKnown RBP25.07■■□□□ 1.6
MMP28-203ENST00000612672 ACCSQ96QU6 501 aa25.07■■□□□ 1.6
MMP28-203ENST00000612672 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 SRRM3A6NNA2 597 aaPredicted RBP25.06■■□□□ 1.6
MMP28-203ENST00000612672 ADAM23O75077 832 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 KLF8O95600 359 aaPredicted RBP25.06■■□□□ 1.6
MMP28-203ENST00000612672 PCSK1P29120 753 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 LHX1P48742 406 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 TRIM61Q5EBN2 209 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 C11orf74Q86VG3 221 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 TMEFF1Q8IYR6 380 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 FSIP1Q8NA03 581 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 SPATA18Q8TC71 538 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 SPATA17Q96L03 361 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 SMPD4Q9NXE4 827 aa25.06■■□□□ 1.6
MMP28-203ENST00000612672 EVLQ9UI08 416 aaPredicted RBP25.06■■□□□ 1.6
MMP28-203ENST00000612672 HYAL3O43820 417 aaPredicted RBP25.05■■□□□ 1.6
MMP28-203ENST00000612672 GCNT3O95395 438 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 OLFM2O95897 454 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 TIE1P35590 1138 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 MAPK8P45983 427 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 RBP5P82980 135 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 DHCR24Q15392 516 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 MAP7D1Q3KQU3 841 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 ADGRG2Q8IZP9 1017 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 NOC3LQ8WTT2 800 aaKnown RBP25.05■■□□□ 1.6
MMP28-203ENST00000612672 CACTINQ8WUQ7 758 aaKnown RBP25.05■■□□□ 1.6
MMP28-203ENST00000612672 TTLL2Q9BWV7 592 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 CPQQ9Y646 472 aa25.05■■□□□ 1.6
MMP28-203ENST00000612672 ZNF840PA6NDX5 716 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 GARTP22102 1010 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 KIR2DL1P43626 348 aaPredicted RBP25.04■■□□□ 1.6
MMP28-203ENST00000612672 SLC7A9P82251 487 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 KDSRQ06136 332 aa25.04■■□□□ 1.6
MMP28-203ENST00000612672 RHBDF2Q6PJF5 856 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms