RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PRICKLE2Q7Z3G6 844 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MON1AQ86VX9 555 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ERICH1Q86X53 443 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 EFCAB13Q8IY85 973 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 RGL4Q8IZJ4 473 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CEP120Q8N960 986 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DNASE2BQ8WZ79 361 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ATP2A3Q93084 1043 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SNX21Q969T3 373 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 C18orf25Q96B23 403 aaPredicted RBP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TMEM176AQ96HP8 235 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GCNAQ96QF7 691 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CCDC113Q9H0I3 377 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 KCNMB3Q9NPA1 279 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZDHHC4Q9NPG8 344 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GPRC5CQ9NQ84 441 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CALCOCO1Q9P1Z2 691 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 KIF3AQ9Y496 699 aa7.79□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ABCA12Q86UK0 2595 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 A0A1B0GTW7 788 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 LYPLA2O95372 231 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 JUPP14923 745 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MATKP42679 507 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLC6A11P48066 632 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 IFNAR2P48551 515 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TUFMP49411 452 aaKnown RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 RARRES1P49788 294 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CLDN6P56747 220 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 FAM160A1Q05DH4 1040 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 USP4Q13107 963 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TARDBPQ13148 414 aaKnown RBP eCLIP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SERINC3Q13530 473 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 MYBPC2Q14324 1141 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TMEM132AQ24JP5 1023 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NT5DC1Q5TFE4 455 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ARHGAP40Q5TG30 622 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZNF574Q6ZN55 896 aaPredicted RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TPH2Q8IWU9 490 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TMEM130Q8N3G9 435 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 NSUN7Q8NE18 718 aaKnown RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SNRNP27Q8WVK2 155 aaKnown RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 TMX3Q96JJ7 454 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 FAM20AQ96MK3 541 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ACAP3Q96P50 834 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SLC22A12Q96S37 553 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CPNE5Q9HCH3 593 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ANKEF1Q9NU02 776 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 GMIPQ9P107 970 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ORC3Q9UBD5 711 aaPredicted RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 DAXXQ9UER7 740 aaPredicted RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 SRPK3Q9UPE1 567 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 CITO14578 2027 aa7.78□□□□□ -1.16
PTCHD3P1-201ENST00000612350 ATMQ13315 3056 aa7.77□□□□□ -1.16
PTCHD3P1-201ENST00000612350 M0R2N6 131 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TRIM66O15016 1216 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CTDNEP1O95476 244 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CER1O95813 267 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GRM5P41594 1212 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 AARSP49588 968 aaKnown RBP eCLIP7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TMPRSS3P57727 454 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NLRP5P59047 1200 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 UBAP2LQ14157 1087 aaKnown RBP7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 VEPH1Q14D04 833 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CCDC157Q569K6 752 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 WDR45BQ5MNZ6 344 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SYCP2LQ5T4T6 812 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 MAEAQ7L5Y9 396 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CCDC83Q8IWF9 413 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZBTB8OSQ8IWT0 167 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NECAB1Q8N987 351 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 GIPC2Q8TF65 315 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HAS1Q92839 578 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 FOXJ1Q92949 421 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 SEPT5Q99719 369 aaPredicted RBP7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HSD17B14Q9BPX1 270 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 PRR14Q9BWN1 585 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 C2orf40Q9H1Z8 148 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CD248Q9HCU0 757 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CD93Q9NPY3 652 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HSPBP1Q9NZL4 362 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 DDX25Q9UHL0 483 aaKnown RBP7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 HCN2Q9UL51 889 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 CYP8B1Q9UNU6 501 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ANK1P16157 1881 aa7.77□□□□□ -1.17
PTCHD3P1-201ENST00000612350 UBR5O95071 2799 aaPredicted RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ANAPC1Q9H1A4 1944 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 A0A087WWV3 80 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 A0A1W2PQF6 199 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 K7ELQ4 463 aaPredicted RBP7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 BRINP1O60477 761 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 ZNF217O75362 1048 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 TADA3O75528 432 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 KAT7O95251 611 aa7.76□□□□□ -1.17
PTCHD3P1-201ENST00000612350 NFATC1O95644 943 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms