RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	CFAP221	Q4G0U5	840 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	FAM35A	Q86V20	835 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	NXPE3	Q969Y0	559 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	MED10	Q9BTT4	135 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	B3GNT5	Q9BYG0	378 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	ARHGEF3	Q9NR81	526 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	KRT82	Q9NSB4	513 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	SIK3	Q9Y2K2	1263 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	PCDHB4	Q9Y5E5	795 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	FHOD1	Q9Y613	1164 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	ZNF292	O60281	2723 aa		11.88	□□□□□ -0.51
FGFR2-223	ENST00000611527	ZNF638	Q14966	1978 aa	Known RBP	11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	XYLB	O75191	536 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	SERPINC1	P01008	464 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	KRT5	P13647	590 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	ATF6	P18850	670 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	TRIM21	P19474	475 aa	Known RBP	11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	BDNF	P23560	247 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	CYP2F1	P24903	491 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	MAGEA11	P43364	429 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	GPR15	P49685	360 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	ZNF132	P52740	706 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	CACNA2D1	P54289	1103 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	RAD23B	P54727	409 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	ARHGAP44	Q17R89	818 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	UVSSA	Q2YD98	709 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	IQCE	Q6IPM2	695 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	DPY19L2P1	Q6NXN4	242 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	TMEM270	Q6UE05	265 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	RTL10	Q7L3V2	364 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	ENOSF1	Q7L5Y1	443 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	FUK	Q8N0W3	1084 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	C12orf29	Q8N999	325 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	SLC4A11	Q8NBS3	891 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	STKLD1	Q8NE28	680 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	SLC2A14	Q8TDB8	520 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	FGF14	Q92915	247 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	RPP25	Q9BUL9	199 aa	Known RBP	11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	DNAI2	Q9GZS0	605 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	GAN	Q9H2C0	597 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	HSFX1	Q9UBD0	423 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	CDH7	Q9ULB5	785 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527	MIA3	Q5JRA6	1907 aa		11.87	□□□□□ -0.51
FGFR2-223	ENST00000611527		A0A1B0GTH6	734 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	LRRC10B	A6NIK2	292 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	EPHB6	O15197	1021 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	TEX33	O43247	280 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	DCN	P07585	359 aa	Known RBP	11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	CD19	P15391	556 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ADORA2B	P29275	332 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ALDH1A3	P47895	512 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	TUFM	P49411	452 aa	Known RBP	11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	EPHB3	P54753	998 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	MFAP3	P55082	362 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	FANCC	Q00597	558 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	RAPGEF1	Q13905	1077 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	VEPH1	Q14D04	833 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	FILIP1L	Q4L180	1135 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	KLHDC7A	Q5VTJ3	777 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	SDHAF4	Q5VUM1	108 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	PARM1	Q6UWI2	310 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	SCN4B	Q8IWT1	228 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	CRYBG2	Q8N1P7	616 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ELMOD1	Q8N336	334 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ITFG1	Q8TB96	612 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	FGF13	Q92913	245 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	SMARCD1	Q96GM5	515 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	TMEM176A	Q96HP8	235 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	FAM81B	Q96LP2	452 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ERGIC2	Q96RQ1	377 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	FOXQ1	Q9C009	403 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	PLCB1	Q9NQ66	1216 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	RTN4	Q9NQC3	1192 aa	Known RBP	11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	SLC2A4RG	Q9NR83	387 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	TMEM30A	Q9NV96	361 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	HCFC1R1	Q9NWW0	138 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	CEP72	Q9P209	647 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527	DENND4C	Q5VZ89	1909 aa		11.86	□□□□□ -0.51
FGFR2-223	ENST00000611527		F8VP50	259 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	TRIM66	O15016	1216 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	AP1G2	O75843	785 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	CALCA	P01258	141 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	FAM200B	P0CF97	657 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	PNMA6A	P0CW24	399 aa	Predicted RBP	11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	UCHL3	P15374	230 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	BRD2	P25440	801 aa	Known RBP	11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	RPL10A	P62906	217 aa	Known RBP	11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	GPC5	P78333	572 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	DDR2	Q16832	855 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	GOLGA7B	Q2TAP0	167 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	VSTM1	Q6UX27	236 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	PAQR9	Q6ZVX9	377 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	GIPC2	Q8TF65	315 aa		11.85	□□□□□ -0.51
FGFR2-223	ENST00000611527	SHC3	Q92529	594 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms