RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RHOBTB3O94955 611 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 CST3P01034 146 aaPredicted RBP23.21■■□□□ 1.31
CBWD3-207ENST00000611426 PDGFRBP09619 1106 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 PSMC1P62191 440 aaKnown RBP23.21■■□□□ 1.31
CBWD3-207ENST00000611426 CYP24A1Q07973 514 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 NCAPHQ15003 741 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 PSMD6Q15008 389 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 WDR44Q5JSH3 913 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 CC2D1AQ6P1N0 951 aaPredicted RBP23.21■■□□□ 1.31
CBWD3-207ENST00000611426 CGRRF1Q99675 332 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 TRPC7Q9HCX4 862 aa23.21■■□□□ 1.31
CBWD3-207ENST00000611426 WARSP23381 471 aaKnown RBP23.2■■□□□ 1.3
CBWD3-207ENST00000611426 MAGEA11P43364 429 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 RUNX3Q13761 415 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 MAPRE1Q15691 268 aaKnown RBP23.2■■□□□ 1.3
CBWD3-207ENST00000611426 TRIM68Q6AZZ1 485 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 Q6ZS52 159 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 MYLPFQ96A32 169 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 EBF3Q9H4W6 596 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 CRTAC1Q9NQ79 661 aa23.2■■□□□ 1.3
CBWD3-207ENST00000611426 CGNQ9P2M7 1197 aaKnown RBP23.2■■□□□ 1.3
CBWD3-207ENST00000611426 BECN2A8MW95 431 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 GOLGA6L19H0YKK7 550 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 TADA3O75528 432 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 GNL1P36915 607 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-207ENST00000611426 MYL5Q02045 173 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 CYP27A1Q02318 531 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 CCINQ13939 588 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 ZNF268Q14587 947 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-207ENST00000611426 KNOP1Q1ED39 458 aaKnown RBP23.19■■□□□ 1.3
CBWD3-207ENST00000611426 BMT2Q1RMZ1 405 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 COBLL1Q53SF7 1204 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 ZNF658Q5TYW1 1059 aaPredicted RBP23.19■■□□□ 1.3
CBWD3-207ENST00000611426 ERMP1Q7Z2K6 904 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 SYNPOQ8N3V7 929 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 RMDN1Q96DB5 314 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 CYP2S1Q96SQ9 504 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 SNX25Q9H3E2 840 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 HPS4Q9NQG7 708 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 DNAH14Q0VDD8 3507 aa23.19■■□□□ 1.3
CBWD3-207ENST00000611426 TRAV19A0A0A6YYK7 116 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 USP17L7P0C7H9 530 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 BDNFP23560 247 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 GRIK1P39086 918 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 TRPC3Q13507 836 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 WDR72Q3MJ13 1102 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 VSTM1Q6UX27 236 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 AOPEPQ8N6M6 819 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 TTC16Q8NEE8 873 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 ENOX1Q8TC92 643 aaKnown RBP23.18■■□□□ 1.3
CBWD3-207ENST00000611426 MRPL45Q9BRJ2 306 aaKnown RBP23.18■■□□□ 1.3
CBWD3-207ENST00000611426 RAB23Q9ULC3 237 aa23.18■■□□□ 1.3
CBWD3-207ENST00000611426 EXOC3O60645 756 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 CKMP06732 381 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 TNNC1P63316 161 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 AMPD2Q01433 879 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 C12orf56Q8IXR9 622 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 GPR161Q8N6U8 529 aaKnown RBP23.17■■□□□ 1.3
CBWD3-207ENST00000611426 OR6B3Q8NGW1 331 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 RIN3Q8TB24 985 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 MYCBPAPQ8TBZ2 947 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 ZNF516Q92618 1163 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 CCDC47Q96A33 483 aaKnown RBP23.17■■□□□ 1.3
CBWD3-207ENST00000611426 SPATA17Q96L03 361 aa23.17■■□□□ 1.3
CBWD3-207ENST00000611426 OTOL1A6NHN0 477 aaPredicted RBP23.16■■□□□ 1.3
CBWD3-207ENST00000611426 CHURC1-FNTBB4DL54 471 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 PPP1R3GB7ZBB8 358 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 TACC1O75410 805 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 PAPSS2O95340 614 aaPredicted RBP23.16■■□□□ 1.3
CBWD3-207ENST00000611426 FAM163BP0C2L3 166 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 ANXA13P27216 316 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 PPP1R2P41236 205 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 FNTBP49356 437 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 GRSF1Q12849 480 aaKnown RBP eCLIP23.16■■□□□ 1.3
CBWD3-207ENST00000611426 PDGFRLQ15198 375 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 MDH1BQ5I0G3 518 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 ISM2Q6H9L7 571 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 GOLGA5Q8TBA6 731 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 PCED1BQ96HM7 432 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 CEP295NLQ96MC4 621 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 SLC22A12Q96S37 553 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 GMEB2Q9UKD1 530 aa23.16■■□□□ 1.3
CBWD3-207ENST00000611426 K7ESF4 209 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 PHACTR2O75167 634 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 ARSAP15289 507 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 MYL6P60660 151 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 DMWDQ09019 674 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 MTF1Q14872 753 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 LPAL2Q16609 132 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 KMT5BQ4FZB7 885 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 DENND5BQ6ZUT9 1274 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 ARL14EPQ8N8R7 260 aaPredicted RBP23.15■■□□□ 1.3
CBWD3-207ENST00000611426 C2orf42Q9NWW7 574 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 DUS2Q9NX74 493 aaKnown RBP23.15■■□□□ 1.3
CBWD3-207ENST00000611426 NXF1Q9UBU9 619 aaKnown RBP23.15■■□□□ 1.3
CBWD3-207ENST00000611426 CEP250Q9BV73 2442 aa23.15■■□□□ 1.3
CBWD3-207ENST00000611426 TRDMT1O14717 391 aaKnown RBP23.14■■□□□ 1.3
CBWD3-207ENST00000611426 TRIM66O15016 1216 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 AP5Z1O43299 807 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 HDCP19113 662 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms