RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 PMF1Q6P1K2 205 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 ALKAL1Q6UXT8 129 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TTC30AQ86WT1 665 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 RFX6Q8HWS3 928 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 ZCCHC9Q8N567 271 aaKnown RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 LRRC52Q8N7C0 313 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 SLC35B2Q8TB61 432 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 C10orf88Q9H8K7 445 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 GJD2Q9UKL4 321 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TPX2Q9ULW0 747 aaKnown RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 UBQLN1Q9UMX0 589 aaKnown RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 NME7Q9Y5B8 376 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TRIP12Q14669 1992 aaPredicted RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 GMNCA6NCL1 334 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
NEK3-205ENST00000610828 CHN1P15882 459 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 AXLP30530 894 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 IRF5Q13568 498 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TRNP1Q6NT89 227 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 BBS12Q6ZW61 710 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 RASAL3Q86YV0 1011 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 PEBP4Q96S96 227 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
NEK3-205ENST00000610828 A8MXQ7 604 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 HAS3O00219 553 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 HCRTO43612 131 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 PCK1P35558 622 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 MAGEA4P43358 317 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 ATP11AP98196 1134 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 SOWAHAQ2M3V2 549 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 CYP4F22Q6NT55 531 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 TAOK1Q7L7X3 1001 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 CMASQ8NFW8 434 aaPredicted RBP14.28□□□□□ -0.12
NEK3-205ENST00000610828 CFAP57Q96MR6 1250 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 LPIN3Q9BQK8 851 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 DPEP3Q9H4B8 488 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 PCDH9Q9HC56 1237 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
NEK3-205ENST00000610828 CTNNAL1Q9UBT7 734 aa14.28□□□□□ -0.12
NEK3-205ENST00000610828 SMIM28A0A1B0GU29 152 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 MYO1CO00159 1063 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 PRPSAP2O60256 369 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 PECAM1P16284 738 aaPredicted RBP14.27□□□□□ -0.12
NEK3-205ENST00000610828 GDF10P55107 478 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 CDH6P55285 790 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 TAZQ16635 292 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 TNFAIP8L3Q5GJ75 292 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 SCUBE3Q8IX30 993 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 SAYSD1Q9NPB0 183 aa14.27□□□□□ -0.12
NEK3-205ENST00000610828 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 MANSC4A6NHS7 340 aaPredicted RBP14.27□□□□□ -0.13
NEK3-205ENST00000610828 PDGFRBP09619 1106 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 RGS2P41220 211 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 MMRN1Q13201 1228 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 MORF4L2Q15014 288 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 PKDCCQ504Y2 493 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 OLFML1Q6UWY5 402 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 CEP128Q6ZU80 1094 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 B4GALNT4Q76KP1 1039 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 RELL1Q8IUW5 271 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 RSAD2Q8WXG1 361 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 USP6NLQ92738 828 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 MAK16Q9BXY0 300 aaKnown RBP14.27□□□□□ -0.13
NEK3-205ENST00000610828 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
NEK3-205ENST00000610828 KPNA7A9QM74 516 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 CD4P01730 458 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 FSCN1Q16658 493 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 HP1BP3Q5SSJ5 553 aaPredicted RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 RNASEH2BQ5TBB1 312 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 SCYL2Q6P3W7 929 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 C17orf99Q6UX52 265 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 EXOC3L1Q86VI1 746 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 UNC93AQ86WB7 457 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 SLC35F5Q8WV83 523 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 ARHGEF2Q92974 986 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 XPO6Q96QU8 1125 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 B3GNT5Q9BYG0 378 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 FRMD8P1Q9BZ68 369 aaPredicted RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 RSAD1Q9HA92 442 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 NGRNQ9NPE2 291 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 FAM169AQ9Y6X4 670 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 APOC4-APOC2K7ER74 178 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 PIRO00625 290 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
NEK3-205ENST00000610828 SPTLC1O15269 473 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 APOC2P02655 101 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
NEK3-205ENST00000610828 ERMARDQ5T6L9 678 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms