RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 TTC30AQ86WT1 665 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 ACTL9Q8TC94 416 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 TMEM121Q9BTD3 319 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 NDC80O14777 642 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 TRAPPC3O43617 180 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 CD48P09326 243 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 RGS2P41220 211 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 LONRF1Q17RB8 773 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 ZNF473Q8WTR7 871 aaKnown RBP29.42■■■□□ 2.3
CSPG5-205ENST00000610462 KATNAL1Q9BW62 490 aa29.42■■■□□ 2.3
CSPG5-205ENST00000610462 GMNCA6NCL1 334 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 SGK1O00141 431 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 FAM107AO95990 144 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 CD4P01730 458 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 PDGFRAP16234 1089 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 RGS7P49802 495 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 TAF5Q15542 800 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 HSPH1Q92598 858 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 PIWIL1Q96J94 861 aaKnown RBP29.41■■■□□ 2.3
CSPG5-205ENST00000610462 SLC4A5Q9BY07 1137 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 GJD2Q9UKL4 321 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 PIRO00625 290 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 TCEA3O75764 348 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 SOWAHAQ2M3V2 549 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 PMF1Q6P1K2 205 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 OR6B3Q8NGW1 331 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 MDM1Q8TC05 714 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 PEBP4Q96S96 227 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 TSPAN18Q96SJ8 248 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 RBM15Q96T37 977 aaKnown RBP eCLIP29.41■■■□□ 2.3
CSPG5-205ENST00000610462 FAM49BQ9NUQ9 324 aa29.41■■■□□ 2.3
CSPG5-205ENST00000610462 SMIM28A0A1B0GU29 152 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 C17orf102A2RUQ5 167 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 CRYBB1P53674 252 aaPredicted RBP29.4■■■□□ 2.3
CSPG5-205ENST00000610462 MORF4L2Q15014 288 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 XKR4Q5GH76 650 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 UBXN11Q5T124 520 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 RFX6Q8HWS3 928 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 SLC35F5Q8WV83 523 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 SELENOSQ9BQE4 189 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 SAE1Q9UBE0 346 aaPredicted RBP29.4■■■□□ 2.3
CSPG5-205ENST00000610462 HESX1Q9UBX0 185 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 ARHGAP17Q68EM7 881 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 B4GALNT4Q76KP1 1039 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 TMEM110Q86TL2 294 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 APBA2Q99767 749 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 RSAD1Q9HA92 442 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 RNF19AQ9NV58 838 aa29.4■■■□□ 2.3
CSPG5-205ENST00000610462 DPYSL4O14531 572 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 XPOTO43592 962 aaKnown RBP29.39■■■□□ 2.3
CSPG5-205ENST00000610462 ENDOD1O94919 500 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 KCNE1P15382 129 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 MAGEA4P43358 317 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 PSMC4P43686 418 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 FBXO47Q5MNV8 452 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 RNASEH2BQ5TBB1 312 aaKnown RBP29.39■■■□□ 2.3
CSPG5-205ENST00000610462 SH3PXD2AQ5TCZ1 1133 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 OLFML1Q6UWY5 402 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 TAOK1Q7L7X3 1001 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 NME8Q8N427 588 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 KLK14Q9P0G3 267 aa29.39■■■□□ 2.3
CSPG5-205ENST00000610462 IGHA2P01877 340 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 C15orf59Q2T9L4 293 aaPredicted RBP29.38■■■□□ 2.29
CSPG5-205ENST00000610462 CYP4V2Q6ZWL3 525 aaPredicted RBP29.38■■■□□ 2.29
CSPG5-205ENST00000610462 STK32AQ8WU08 396 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 ZNF560Q96MR9 790 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 A8MXQ7 604 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 GNAT1P11488 350 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 CHN1P15882 459 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 SNX16P57768 344 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 SLC6A3Q01959 620 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 ERMARDQ5T6L9 678 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 SESTD1Q86VW0 696 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 SOCS4Q8WXH5 440 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 C9orf72Q96LT7 481 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 XPO6Q96QU8 1125 aaKnown RBP29.38■■■□□ 2.29
CSPG5-205ENST00000610462 CALN1Q9BXU9 219 aa29.38■■■□□ 2.29
CSPG5-205ENST00000610462 APOC4-APOC2K7ER74 178 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 GRAP2O75791 330 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 IFNB1P01574 187 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 APOC2P02655 101 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 ATP5DP30049 168 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 HOXC8P31273 242 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 FSCN1Q16658 493 aaKnown RBP29.37■■■□□ 2.29
CSPG5-205ENST00000610462 CCDC14Q49A88 953 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 RNF39Q9H2S5 420 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 DPEP3Q9H4B8 488 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 GDAP2Q9NXN4 497 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 SHOC2Q9UQ13 582 aa29.37■■■□□ 2.29
CSPG5-205ENST00000610462 ABHD2P08910 425 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PECAM1P16284 738 aaPredicted RBP29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PNPLA4P41247 253 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PDE4CQ08493 712 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PCGF5Q86SE9 256 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 EXOC3L1Q86VI1 746 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 SAYSD1Q9NPB0 183 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 KPNA7A9QM74 516 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PRPSAP2O60256 369 aa29.36■■■□□ 2.29
CSPG5-205ENST00000610462 PURAQ00577 322 aaKnown RBP29.36■■■□□ 2.29
CSPG5-205ENST00000610462 RAB6CQ53S08 254 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms