RNA–Protein interactions for RNA: ENST00000610417.4

SAMD4B-213, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SAMD4B, Length 3,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-213ENST00000610417 PDGFRAP16234 1089 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ADORA2AP29274 412 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CSE1LP55060 971 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 OTUD4Q01804 1114 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CCL15Q16663 113 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 EML3Q32P44 896 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 FIP1L1Q6UN15 594 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ADAM32Q8TC27 787 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 HPDLQ96IR7 371 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ZBED3Q96IU2 234 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 STRA6Q9BX79 667 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DCLK3Q9C098 648 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 NEU2Q9Y3R4 380 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 PPEF2O14830 753 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 OSBPP22059 807 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 RFX1P22670 979 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 PSMA3P25788 255 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ATXN1P54253 815 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DNAJC3Q13217 504 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 ZCCHC8Q6NZY4 707 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DDX1Q92499 740 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 NELL1Q92832 810 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 PIWIL1Q96J94 861 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 TRIM56Q9BRZ2 755 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 MYL3P08590 195 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 IQCF3P0C7M6 154 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 PTGIRP43119 386 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 USP4Q13107 963 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 TFDP1Q14186 410 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 KBTBD12Q3ZCT8 623 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 WLSQ5T9L3 541 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 KIAA1614Q5VZ46 1190 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 C11orf63Q6NUN7 778 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CTU1Q7Z7A3 348 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 GPC2Q8N158 579 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CFAP57Q96MR6 1250 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 CDT1Q9H211 546 aa11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 MMADHCQ9H3L0 296 aaPredicted RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
SAMD4B-213ENST00000610417 DOCK5Q9H7D0 1870 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 LAMA2P24043 3122 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.62e-9■□□□□ 10.3
SAMD4B-213ENST00000610417 MUTP22033 750 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 MYBPC3Q14896 1274 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 PTPN20Q4JDL3 420 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 KDELC2Q7Z4H8 507 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 KIAA1586Q9HCI6 787 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 PIN4Q9Y237 131 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 ATP9BO43861 1147 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 LYPLA2O95372 231 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 NDST1P52848 882 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 GCNT1Q02742 428 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 NME3Q13232 169 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 LURAP1LQ8IV03 231 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 CCNYQ8ND76 341 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 OLIG1Q8TAK6 271 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 CHMP6Q96FZ7 201 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 VMP1Q96GC9 406 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 GPR20Q99678 358 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 DHX35Q9H5Z1 703 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 CITO14578 2027 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 KITP10721 976 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 RBP3P10745 1247 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 ELF1P32519 619 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 EPHX2P34913 555 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 MAGEA4P43358 317 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 SGSM1Q2NKQ1 1148 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 TAOK1Q7L7X3 1001 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 ERO1BQ86YB8 467 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 SLC15A3Q8IY34 581 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 CCDC197Q8NCU1 140 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 PYROXD1Q8WU10 500 aa11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 ACO2Q99798 780 aaKnown RBP11.31□□□□□ -0.6
SAMD4B-213ENST00000610417 A8MXQ7 604 aa11.3□□□□□ -0.6
SAMD4B-213ENST00000610417 H3BRB1 525 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms