RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 KNOP1Q1ED39 458 aaKnown RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 ATL3Q6DD88 541 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 LAIR1Q6GTX8 287 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 LONP2Q86WA8 852 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 C12orf56Q8IXR9 622 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 CEP57L1Q8IYX8 460 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 XYLT2Q9H1B5 865 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 ECT2Q9H8V3 914 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 CFAP45Q9UL16 551 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 KIAA1549LQ6ZVL6 1849 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 F8VP50 259 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 CLDN5O00501 218 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 SLFN14P0C7P3 912 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 PTPN1P18031 435 aaKnown RBP17.07■□□□□ 0.32
SGMS1-209ENST00000609445 HDCP19113 662 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 ANXA13P27216 316 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 IFNAR2P48551 515 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 PXNP49023 591 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-209ENST00000609445 GALK1P51570 392 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 STK4Q13043 487 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 TDRD10Q5VZ19 366 aaKnown RBP17.07■□□□□ 0.32
SGMS1-209ENST00000609445 DENND5BQ6ZUT9 1274 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 GPR161Q8N6U8 529 aaKnown RBP17.07■□□□□ 0.32
SGMS1-209ENST00000609445 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 PAGE5Q96GU1 130 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 ZNF518BQ9C0D4 1074 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 LINC00597Q9H2U6 94 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
SGMS1-209ENST00000609445 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
SGMS1-209ENST00000609445 MYOFQ9NZM1 2061 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 LRRIQ3A6PVS8 624 aaPredicted RBP17.06■□□□□ 0.32
SGMS1-209ENST00000609445 TRIM66O15016 1216 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 RNF40O75150 1001 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 PHACTR2O75167 634 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 STAU1O95793 577 aaKnown RBP17.06■□□□□ 0.32
SGMS1-209ENST00000609445 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 CDH8P55286 799 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 ZXDBP98169 803 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 BIRC3Q13489 604 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 EML3Q32P44 896 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 WDR5BQ86VZ2 330 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 EZH1Q92800 747 aaPredicted RBP17.06■□□□□ 0.32
SGMS1-209ENST00000609445 P2RY13Q9BPV8 354 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 TTLL2Q9BWV7 592 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 EXOC1Q9NV70 894 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 TRPM5Q9NZQ8 1165 aa17.06■□□□□ 0.32
SGMS1-209ENST00000609445 A8MXQ7 604 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 RETP07949 1114 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 PFKFB1P16118 471 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 HOXA6P31267 233 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
SGMS1-209ENST00000609445 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 CEP68Q76N32 757 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
SGMS1-209ENST00000609445 B3GALNT2Q8NCR0 500 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 ATP2A3Q93084 1043 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 SYAP1Q96A49 352 aaPredicted RBP17.05■□□□□ 0.32
SGMS1-209ENST00000609445 C8orf48Q96LL4 319 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 KCTD10Q9H3F6 313 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 DMAC2Q9NW81 257 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.05■□□□□ 0.32
SGMS1-209ENST00000609445 MYH10P35580 1976 aa17.05■□□□□ 0.32
SGMS1-209ENST00000609445 ZNF840PA6NDX5 716 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 LEFTY2O00292 366 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 CLSTN1O94985 981 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 VNN1O95497 513 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 ABL1P00519 1130 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 C4BPAP04003 597 aaKnown RBP17.04■□□□□ 0.32
SGMS1-209ENST00000609445 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 DRD1P21728 446 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 ATICP31939 592 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 CNR2P34972 360 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 DLG4P78352 724 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 AMPD2Q01433 879 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 LMNB2Q03252 620 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 TAF10Q12962 218 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 ZNF699Q32M78 642 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 FAM160A2Q8N612 972 aaPredicted RBP17.04■□□□□ 0.32
SGMS1-209ENST00000609445 GOLGA5Q8TBA6 731 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 CD101Q93033 1021 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 CEP295NLQ96MC4 621 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 RNF38Q9H0F5 515 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 SLC8A2Q9UPR5 921 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
SGMS1-209ENST00000609445 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
SGMS1-209ENST00000609445 TCF3P15923 654 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 ATXN1P54253 815 aaKnown RBP17.03■□□□□ 0.32
SGMS1-209ENST00000609445 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
SGMS1-209ENST00000609445 NCOA4Q13772 614 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms