RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 PCDHGC3Q9UN70 934 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SAR1BQ9Y6B6 198 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 AK5Q9Y6K8 562 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 ANKARQ7Z5J8 1434 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 ARHGEF35A5YM69 484 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SLC9B1P1A6NJY1 282 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 H3BRJ5 948 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 TP73O15350 636 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 ZPR1O75312 459 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 CCNKO75909 580 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 GNAZP19086 355 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 GSTM2P28161 218 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 PKLRP30613 574 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 PAFAH1B1P43034 410 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 RGS7P49802 495 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SRP54P61011 504 aaKnown RBP4.93□□□□□ -1.62
HDDC2-208ENST00000609021 RNF4P78317 190 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 POU6F2P78424 691 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SPAG1Q07617 926 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 IFIT5Q13325 482 aaKnown RBP4.93□□□□□ -1.62
HDDC2-208ENST00000609021 NPTX1Q15818 432 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 WASHC2DQ5SRD0 308 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 ZNF852Q6ZMS4 543 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 MACC1Q6ZN28 852 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 TMPRSS9Q7Z410 1059 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 DCP2Q8IU60 420 aaKnown RBP4.93□□□□□ -1.62
HDDC2-208ENST00000609021 VSTM4Q8IW00 320 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 TRIM59Q8IWR1 403 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 IFNL2Q8IZJ0 200 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 DEPDC4Q8N2C3 294 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 CATSPER1Q8NEC5 780 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 GRPEL2Q8TAA5 225 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SLC44A1Q8WWI5 657 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 PHF12Q96QT6 1004 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 COG4Q9H9E3 785 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 SP110Q9HB58 689 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 S100A14Q9HCY8 104 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 TMOD3Q9NYL9 352 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 DNAJB4Q9UDY4 337 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 NFU1Q9UMS0 254 aa4.93□□□□□ -1.62
HDDC2-208ENST00000609021 PVALEFA0A1B0GWK0 134 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 OR6C74A6NCV1 312 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 FPGTO14772 594 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 AREL1O15033 823 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CYP1A1P04798 512 aaPredicted RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 NFICP08651 508 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 PDHA2P29803 388 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CTNNB1P35222 781 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 HTR2BP41595 481 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 HADHBP55084 474 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SEC13P55735 322 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 NCALDP61601 193 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CCNA1P78396 465 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CUL2Q13617 745 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SNX17Q15036 470 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 QPCTQ16769 361 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 LSM12Q3MHD2 195 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CACHD1Q5VU97 1274 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 PYHIN1Q6K0P9 492 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 KIAA1841Q6NSI8 718 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ERAP2Q6P179 960 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 NET1Q7Z628 596 aaPredicted RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 C12orf56Q8IXR9 622 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CENPSQ8N2Z9 138 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 AVL9Q8NBF6 648 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 VPS33AQ96AX1 596 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ERLEC1Q96DZ1 483 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 EXOC2Q96KP1 924 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ZIM3Q96PE6 472 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SLC29A1Q99808 456 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 NOC4LQ9BVI4 516 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ANKRD2Q9GZV1 360 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 STN1Q9H668 368 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CREBZFQ9NS37 354 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 IARS2Q9NSE4 1012 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 IL37Q9NZH6 218 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SLC7A8Q9UHI5 535 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 BAG5Q9UL15 447 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SMG5Q9UPR3 1016 aaKnown RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SPG7Q9UQ90 795 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ZNF175Q9Y473 711 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 PCDHGA2Q9Y5H1 932 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 NUP188Q5SRE5 1749 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 FAM172BPA6NC97 362 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ALOX15BO15296 676 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 AQP9O43315 295 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 MICAL2O94851 1124 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 ATP6V1B1P15313 513 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CHN1P15882 459 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 HSD3B2P26439 372 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SOX6P35712 828 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CD86P42081 329 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 STARP49675 285 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CEBPAP49715 358 aaPredicted RBP4.92□□□□□ -1.62
HDDC2-208ENST00000609021 CDR2Q01850 454 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 RAD51Q06609 339 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 SPIRE1Q08AE8 756 aa4.92□□□□□ -1.62
HDDC2-208ENST00000609021 FBXO48Q5FWF7 155 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms