RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TTC39BQ5VTQ0 682 aaPredicted RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 LMBRD2Q68DH5 695 aaPredicted RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 KYAT3Q6YP21 454 aaKnown RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 SCUBE1Q8IWY4 988 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 DTNBP1Q96EV8 351 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 FAM111AQ96PZ2 611 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 TAAR1Q96RJ0 339 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 PDCD2LQ9BRP1 358 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 SIKE1Q9BRV8 207 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 IQCGQ9H095 443 aaKnown RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 POLR3FQ9H1D9 316 aaPredicted RBP23.37■■□□□ 1.33
SHANK2-220ENST00000608988 GINM1Q9NU53 330 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 TAGLN3Q9UI15 199 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 SLC4A7Q9Y6M7 1214 aa23.37■■□□□ 1.33
SHANK2-220ENST00000608988 GOLGA8RI6L899 631 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 FKBP6O75344 327 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 SLC25A11Q02978 314 aaKnown RBP23.36■■□□□ 1.33
SHANK2-220ENST00000608988 LGSNQ5TDP6 509 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 AAGABQ6PD74 315 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 TTC17Q96AE7 1141 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 SERAC1Q96JX3 654 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 ASCC2Q9H1I8 757 aaPredicted RBP23.36■■□□□ 1.33
SHANK2-220ENST00000608988 XPNPEP1Q9NQW7 623 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 SIP14410 1827 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 PTPRJQ12913 1337 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 B2RBV5 119 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 SPECC1L-ADORA2AF8WAN1 911 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 COPEO14579 308 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 WDR46O15213 610 aaKnown RBP23.36■■□□□ 1.33
SHANK2-220ENST00000608988 TMEM63AO94886 807 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 UPP2O95045 317 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 PSAPP07602 524 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 ANPEPP15144 967 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 POLR2BP30876 1174 aaKnown RBP23.36■■□□□ 1.33
SHANK2-220ENST00000608988 DSG1Q02413 1049 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 GRM1Q13255 1194 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 DBN1Q16643 649 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 TXNRD3NBQ6F5E7 133 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 SLC26A11Q86WA9 606 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 NMUR2Q9GZQ4 415 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 PXMP2Q9NR77 195 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 GABBR1Q9UBS5 961 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 PLA2G4CQ9UP65 541 aa23.36■■□□□ 1.33
SHANK2-220ENST00000608988 MAP3K13O43283 966 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 CST8O60676 142 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 CSDE1O75534 798 aaKnown RBP23.35■■□□□ 1.33
SHANK2-220ENST00000608988 STAM2O75886 525 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 CRABP2P29373 138 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 ACTR3P61158 418 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 GAD2Q05329 585 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 FAAP100Q0VG06 881 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 NCOA4Q13772 614 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 ZYXQ15942 572 aaKnown RBP23.35■■□□□ 1.33
SHANK2-220ENST00000608988 FAM161BQ96MY7 647 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 ADAM33Q9BZ11 813 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 PIDD1Q9HB75 910 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 NDE1Q9NXR1 346 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 TEX264Q9Y6I9 313 aa23.35■■□□□ 1.33
SHANK2-220ENST00000608988 TCRBV9S1A1TA0A576 114 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 APOC4-APOC2K7ER74 178 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 ZNF862O60290 1169 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 KRT37O76014 449 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 APOC2P02655 101 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 MYCLP12524 364 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 KDELR1P24390 212 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 STIP1P31948 543 aaKnown RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 CCNFP41002 786 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 RPS6KA3P51812 740 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 GDF10P55107 478 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 ANGEL2Q5VTE6 544 aaKnown RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 FKBP1CQ5VVH2 108 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 SAMD1Q6SPF0 538 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 DTX3LQ8TDB6 740 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 NCSTNQ92542 709 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 LPAR1Q92633 364 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 PPP2R3CQ969Q6 453 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 PRR11Q96HE9 360 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 GJD4Q96KN9 370 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 KLF6Q99612 283 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 DMAP1Q9NPF5 467 aaPredicted RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 CYP26B1Q9NR63 512 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 SPDYE2BA6NHP3 402 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 TCP10L2B9ZVM9 353 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 TRDMT1O14717 391 aaKnown RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 CHADO15335 359 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 SPDYE6P0CI01 402 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 PYGBP11216 843 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 PSMA2P25787 234 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 ELK3P41970 407 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 WNT7BP56706 349 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 RPL26P61254 145 aaKnown RBP23.34■■□□□ 1.33
SHANK2-220ENST00000608988 DPYSL3Q14195 570 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 SPDYE2Q495Y8 402 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 EGFL6Q8IUX8 553 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 AZIN2Q96A70 460 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 RMDN3Q96TC7 470 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 ECSITQ9BQ95 431 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 PPP1R12CQ9BZL4 782 aa23.34■■□□□ 1.33
SHANK2-220ENST00000608988 SLC38A10Q9HBR0 1119 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms