RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 CUL3Q13618 768 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SLC1A5Q15758 541 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 HEATR6Q6AI08 1181 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 POU5F2Q8N7G0 328 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 HELQQ8TDG4 1101 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TUBB6Q9BUF5 446 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 KCNH4Q9UQ05 1017 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MRPL42Q9Y6G3 142 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 DGKIO75912 1065 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SLC25A27O95847 323 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 CCNE2O96020 404 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TNFSF9P41273 254 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MRPS9P82933 396 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TNFAIP2Q03169 654 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 STX3Q13277 289 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MYBPC2Q14324 1141 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 PRAMEF19Q5SWL8 479 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 ZNF677Q86XU0 584 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SLC9A9Q8IVB4 645 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 E2F7Q96AV8 911 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TIPINQ9BVW5 301 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TMEM106CQ9BVX2 250 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 LRRC4Q9HBW1 653 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 BATF3Q9NR55 127 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 KLHL8Q9P2G9 620 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 CEP290O15078 2479 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KBTBD13C9JR72 458 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 AVILO75366 819 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 UNC5CO95185 931 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 TAC1P20366 129 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GCNT1Q02742 428 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 MMEL1Q495T6 779 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 SH2D4BQ5SQS7 431 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 CCNYL1Q8N7R7 359 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GLIS1Q8NBF1 620 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 AFG1LQ8WV93 481 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 PPWD1Q96BP3 646 aaKnown RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 DMAC2Q9NW81 257 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 LGR5O75473 907 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 LMNAP02545 664 aaKnown RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 OATP04181 439 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 TCF4P15884 667 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 TCN1P20061 433 aaPredicted RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GARTP22102 1010 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 ITKQ08881 620 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KIZQ2M2Z5 673 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 NBPF20Q3BBV1 942 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GLRA4Q5JXX5 417 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 EFCAB12Q6NXP0 572 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 PPP1R2P3Q6NXS1 205 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 C6orf89Q6UWU4 347 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 PID1Q7Z2X4 250 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 RIBC1Q8N443 379 aaPredicted RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 ZNF317Q96PQ6 595 aaPredicted RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 NOCTQ9UK39 431 aaKnown RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 MEI4A8MW99 385 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 VWA5AO00534 786 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 ADSSP30520 456 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 FOXN2P32314 431 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 AQP5P55064 265 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 SREBF2Q12772 1141 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KPNB1Q14974 876 aaKnown RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 MORF4L2Q15014 288 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 EML3Q32P44 896 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GLT1D1Q96MS3 346 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 GCOM2Q9BZD3 368 aaPredicted RBP10.8□□□□□ -0.68
CTCFL-216ENST00000608263 SLC17A7Q9P2U7 560 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 MCM8Q9UJA3 840 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 PACSIN3Q9UKS6 424 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 ROBO1Q9Y6N7 1651 aa10.8□□□□□ -0.68
CTCFL-216ENST00000608263 ZMYM2Q9UBW7 1377 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PHLPP1O60346 1717 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PARP4Q9UKK3 1724 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 NUP98P52948 1817 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 EME2A4GXA9 379 aaPredicted RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 NFKBIEO00221 500 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 APOL1O14791 398 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SLC4A1P02730 911 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 GJB1P08034 283 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SNRPAP09012 282 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 ZNF286BP0CG31 522 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SNX16P57768 344 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 RASA2Q15283 850 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PAN2Q504Q3 1202 aaKnown RBP10.79□□□□□ -0.68
CTCFL-216ENST00000608263 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 VSTM1Q6UX27 236 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PLEKHH3Q7Z736 793 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 CEP120Q8N960 986 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 TEKT4Q8WW24 435 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 PGBD4Q96DM1 585 aa10.79□□□□□ -0.68
CTCFL-216ENST00000608263 WWP1Q9H0M0 922 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms