RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 TMEM59LQ9UK28 342 aa23.06■■□□□ 1.28
USF2-216ENST00000607959 HHLA1C9JL84 531 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 KCNK3O14649 394 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 FAM200BP0CF97 657 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 MAP3K7CLP57077 242 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 FPGSQ05932 587 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 PPIGQ13427 754 aaKnown RBP eCLIP23.05■■□□□ 1.284e-7■□□□□ 9.8
USF2-216ENST00000607959 DCUN1D2Q6PH85 259 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 ZCWPW1Q9H0M4 648 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 CYLDQ9NQC7 956 aa23.05■■□□□ 1.28
USF2-216ENST00000607959 MRPL42Q9Y6G3 142 aaKnown RBP23.05■■□□□ 1.28
USF2-216ENST00000607959 SF3B1O75533 1304 aaKnown RBP eCLIP23.05■■□□□ 1.284e-7■■■■■ 86.9
USF2-216ENST00000607959 F8VP50 259 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 AP1G2O75843 785 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 TCF4P15884 667 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 TAS2R40P59535 323 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 TAP1Q03518 808 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 TMEM240Q5SV17 173 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 FAM102AQ5T9C2 384 aaPredicted RBP23.04■■□□□ 1.28
USF2-216ENST00000607959 RSPO2Q6UXX9 243 aaPredicted RBP23.04■■□□□ 1.28
USF2-216ENST00000607959 GPRIN1Q7Z2K8 1008 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 RNF168Q8IYW5 571 aaPredicted RBP23.04■■□□□ 1.28
USF2-216ENST00000607959 ARFGAP1Q8N6T3 406 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 MIS12Q9H081 205 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 CSNK1G1Q9HCP0 422 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 KIAA1671Q9BY89 1806 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 TBC1D4O60343 1298 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 FGBP02675 491 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 SYN1P17600 705 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 CTNNA2P26232 953 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 CTNNA1P35221 906 aaKnown RBP23.04■■□□□ 1.28
USF2-216ENST00000607959 NAA30Q147X3 362 aaPredicted RBP23.04■■□□□ 1.28
USF2-216ENST00000607959 CEP57Q86XR8 500 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 KCTD13Q8WZ19 329 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.04■■□□□ 1.282e-8■■■■□ 20.9
USF2-216ENST00000607959 PRKAG2Q9UGJ0 569 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 IP6K2Q9UHH9 426 aa23.04■■□□□ 1.28
USF2-216ENST00000607959 SPOPO43791 374 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 TADA3O75528 432 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 LCP1P13796 627 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 BDNFP23560 247 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 MAN1A1P33908 653 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 GTF2F1P35269 517 aaKnown RBP eCLIP23.03■■□□□ 1.284e-7■■■□□ 16.2
USF2-216ENST00000607959 ALDH7A1P49419 539 aaKnown RBP23.03■■□□□ 1.28
USF2-216ENST00000607959 NDUFV1P49821 464 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 TSPY1Q01534 308 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 SLC6A3Q01959 620 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 ADCY1Q08828 1119 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 KCNT2Q6UVM3 1135 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 CMTR2Q8IYT2 770 aaKnown RBP23.03■■□□□ 1.28
USF2-216ENST00000607959 IGSF21Q96ID5 467 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 PCDHA3Q9Y5H8 950 aa23.03■■□□□ 1.28
USF2-216ENST00000607959 MIF4GDA9UHW6 222 aaKnown RBP23.02■■□□□ 1.28
USF2-216ENST00000607959 CTIFO43310 598 aaKnown RBP23.02■■□□□ 1.28
USF2-216ENST00000607959 GRAP2O75791 330 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 FLT3P36888 993 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 SLC1A1P43005 524 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 NIPA2Q8N8Q9 360 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 FNIP1Q8TF40 1166 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 NDRG1Q92597 394 aaKnown RBP23.02■■□□□ 1.28
USF2-216ENST00000607959 SMARCD1Q96GM5 515 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 C2CD4BA6NLJ0 364 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 CES2O00748 559 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 TERF1P54274 439 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 ADIGQ0VDE8 80 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 BTG3Q14201 252 aaPredicted RBP23.02■■□□□ 1.28
USF2-216ENST00000607959 SLC39A12Q504Y0 691 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 RAB41Q5JT25 222 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 AADACL2Q6P093 401 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 TSC1Q92574 1164 aa23.02■■□□□ 1.28
USF2-216ENST00000607959 PATJQ8NI35 1801 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 CAPN15O75808 1086 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 LINC00271P0C7V0 271 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 ACADSBP45954 432 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 RNASE9P60153 205 aaKnown RBP23.01■■□□□ 1.27
USF2-216ENST00000607959 ELAVL2Q12926 359 aaKnown RBP23.01■■□□□ 1.27
USF2-216ENST00000607959 CTXN3Q4LDR2 81 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 RAB6CQ53S08 254 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 ZNF572Q7Z3I7 529 aaPredicted RBP23.01■■□□□ 1.27
USF2-216ENST00000607959 SLC39A11Q8N1S5 342 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 PBKQ96KB5 322 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 RAB6CQ9H0N0 254 aa23.01■■□□□ 1.27
USF2-216ENST00000607959 ZBBXA8MT70 800 aa23■■□□□ 1.27
USF2-216ENST00000607959 HTRA4P83105 476 aaPredicted RBP23■■□□□ 1.27
USF2-216ENST00000607959 ZNF211Q13398 564 aaPredicted RBP23■■□□□ 1.27
USF2-216ENST00000607959 ZDHHC17Q8IUH5 632 aa23■■□□□ 1.27
USF2-216ENST00000607959 RASGEF1CQ8N431 466 aa23■■□□□ 1.27
USF2-216ENST00000607959 CEP112Q8N8E3 955 aa23■■□□□ 1.27
USF2-216ENST00000607959 NOL12Q9UGY1 213 aaKnown RBP eCLIP23■■□□□ 1.27
USF2-216ENST00000607959 ZMYND8Q9ULU4 1186 aaPredicted RBP23■■□□□ 1.27
USF2-216ENST00000607959 USTQ9Y2C2 406 aa23■■□□□ 1.27
USF2-216ENST00000607959 V9GYY5 206 aaPredicted RBP23■■□□□ 1.27
USF2-216ENST00000607959 GJB5O95377 273 aa23■■□□□ 1.27
USF2-216ENST00000607959 VNN2O95498 520 aa23■■□□□ 1.27
USF2-216ENST00000607959 CYP2F1P24903 491 aa23■■□□□ 1.27
USF2-216ENST00000607959 MAPRE1Q15691 268 aaKnown RBP23■■□□□ 1.27
USF2-216ENST00000607959 PRSS55Q6UWB4 352 aaPredicted RBP23■■□□□ 1.27
USF2-216ENST00000607959 SLC26A9Q7LBE3 791 aa23■■□□□ 1.27
USF2-216ENST00000607959 COLGALT1Q8NBJ5 622 aa23■■□□□ 1.27
USF2-216ENST00000607959 RXFP2Q8WXD0 754 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms