RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 KIAA1549LQ6ZVL6 1849 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 A0A087X0B3 334 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 FRMD3A2A2Y4 597 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 LEFTY2O00292 366 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 GABRDO14764 452 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 SCAMP3O14828 347 aaKnown RBP15.87■□□□□ 0.13
CTSA-216ENST00000607212 GNL1P36915 607 aaPredicted RBP15.87■□□□□ 0.13
CTSA-216ENST00000607212 CYP2J2P51589 502 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 LIMK1P53667 647 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 AMPD3Q01432 767 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 TRPC3Q13507 836 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 CUL4AQ13619 759 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 USP39Q53GS9 565 aaKnown RBP15.87■□□□□ 0.13
CTSA-216ENST00000607212 TCEAL6Q6IPX3 200 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 ANO7Q6IWH7 933 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 FAM171BQ6P995 826 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 WDR49Q8IV35 697 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 KBTBD7Q8WVZ9 684 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 TCEAL3Q969E4 200 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 DHX58Q96C10 678 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 SPATA17Q96L03 361 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 EDEM2Q9BV94 578 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 KIAA1586Q9HCI6 787 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 CRTAC1Q9NQ79 661 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 SMPD4Q9NXE4 827 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 GCNT4Q9P109 453 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 ANGPTL2Q9UKU9 493 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 ARHGAP26Q9UNA1 814 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 TPRP12270 2363 aaKnown RBP15.87■□□□□ 0.13
CTSA-216ENST00000607212 THADAQ6YHU6 1953 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
CTSA-216ENST00000607212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 PHACTR2O75167 634 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 CAVIN2O95810 425 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 MBL2P11226 248 aaPredicted RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 WARSP23381 471 aaKnown RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 N4BP2L1Q5TBK1 243 aaPredicted RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 TRAPPC11Q7Z392 1133 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 FILIP1Q7Z7B0 1213 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 NELFCDQ8IXH7 590 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 CCDC33Q8N5R6 958 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 GLIS3Q8NEA6 775 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 CXorf38Q8TB03 319 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 CCDC127Q96BQ5 260 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 PCED1BQ96HM7 432 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 ZC3H10Q96K80 434 aaKnown RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 DUSP15Q9H1R2 295 aaPredicted RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 TNMDQ9H2S6 317 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
CTSA-216ENST00000607212 CPQQ9Y646 472 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 PTPRDP23468 1912 aa15.86■□□□□ 0.13
CTSA-216ENST00000607212 F8VP50 259 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 CLIC2O15247 247 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 USP46P62068 366 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 MYCBPAPQ8TBZ2 947 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 SLITRK1Q96PX8 696 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 MED10Q9BTT4 135 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 BCCIPQ9P287 314 aaKnown RBP eCLIP15.85■□□□□ 0.13
CTSA-216ENST00000607212 NXF1Q9UBU9 619 aaKnown RBP15.85■□□□□ 0.13
CTSA-216ENST00000607212 NUP205Q92621 2012 aa15.85■□□□□ 0.13
CTSA-216ENST00000607212 A8MXQ7 604 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 SLC9A3R1O14745 358 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 MAP3K13O43283 966 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 ALDH1A2O94788 518 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 APODP05090 189 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 PFKLP17858 780 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 DHPSP49366 369 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 SNRNP35Q16560 246 aaKnown RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 WDR72Q3MJ13 1102 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 PLA2G2CQ5R387 149 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 FOXD4L5Q5VV16 416 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 DAB2IPQ5VWQ8 1189 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 PSAPL1Q6NUJ1 521 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 CYP2U1Q7Z449 544 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 C11orf74Q86VG3 221 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 USP33Q8TEY7 942 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 FOXD4L4Q8WXT5 416 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 EZH1Q92800 747 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 ZNF396Q96N95 335 aaPredicted RBP15.84■□□□□ 0.13
CTSA-216ENST00000607212 CGRRF1Q99675 332 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 CFAP97Q9P2B7 532 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 MTMR6Q9Y217 621 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 ATP8B3O60423 1300 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 MYH10P35580 1976 aa15.84■□□□□ 0.13
CTSA-216ENST00000607212 ZNF840PA6NDX5 716 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 C4orf47A7E2U8 309 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 KHNYNO15037 678 aaKnown RBP15.83■□□□□ 0.12
CTSA-216ENST00000607212 SPTLC2O15270 562 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 EIF3DO15371 548 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTSA-216ENST00000607212 STX6O43752 255 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 CYP17A1P05093 508 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 TCF3P15923 654 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 TIE1P35590 1138 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 OPRD1P41143 372 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 PPP3CCP48454 512 aa15.83■□□□□ 0.12
CTSA-216ENST00000607212 NOVA1P51513 510 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms