RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 MSTO1Q9BUK6 570 aa14.34□□□□□ -0.11
CTSA-212ENST00000606394 ODF2LQ9ULJ1 636 aa14.34□□□□□ -0.11
CTSA-212ENST00000606394 ARHGAP26Q9UNA1 814 aa14.34□□□□□ -0.11
CTSA-212ENST00000606394 GPSM3Q9Y4H4 160 aa14.34□□□□□ -0.11
CTSA-212ENST00000606394 TNRC6BQ9UPQ9 1833 aaKnown RBP14.34□□□□□ -0.11
CTSA-212ENST00000606394 APC2O95996 2303 aa14.33□□□□□ -0.11
CTSA-212ENST00000606394 ADAMTS20P59510 1910 aa14.33□□□□□ -0.11
CTSA-212ENST00000606394 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.11
CTSA-212ENST00000606394 SPAARA0A1B0GVQ0 90 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 PP2D1A8MPX8 630 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 KPNA7A9QM74 516 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 EIF2DP41214 584 aaKnown RBP14.33□□□□□ -0.12
CTSA-212ENST00000606394 PNPLA4P41247 253 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 ATXN3P54252 364 aaPredicted RBP14.33□□□□□ -0.12
CTSA-212ENST00000606394 SLC12A3P55017 1021 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 SV2CQ496J9 727 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 LYSMD4Q5XG99 296 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 RAB44Q7Z6P3 723 aaPredicted RBP14.33□□□□□ -0.12
CTSA-212ENST00000606394 NT5DC4Q86YG4 428 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 SH3RF2Q8TEC5 729 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 CYP2S1Q96SQ9 504 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 ACBD6Q9BR61 282 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 TRPC7Q9HCX4 862 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.12
CTSA-212ENST00000606394 TMEM74BQ9NUR3 256 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 DPP3Q9NY33 737 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 PILRBQ9UKJ0 227 aa14.33□□□□□ -0.12
CTSA-212ENST00000606394 OPRD1P41143 372 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 PTGER3P43115 390 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 KCNB1Q14721 858 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 DUOXA1Q1HG43 343 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 CFAP221Q4G0U5 840 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 SPATA18Q8TC71 538 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 CEP295NLQ96MC4 621 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 ZNF560Q96MR9 790 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 SLC22A12Q96S37 553 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 GCNT4Q9P109 453 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 SLC6A14Q9UN76 642 aa14.32□□□□□ -0.12
CTSA-212ENST00000606394 A0A0A0MRY4 1105 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 MYMKA6NI61 221 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 AP5Z1O43299 807 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 OPHN1O60890 802 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 SERPINF2P08697 491 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 PLA2G4BP0C869 781 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 HDCP19113 662 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 GPR15P49685 360 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 TOB1P50616 345 aaPredicted RBP14.31□□□□□ -0.12
CTSA-212ENST00000606394 CDR1P51861 262 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 SEC13P55735 322 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 GFPT1Q06210 699 aaPredicted RBP14.31□□□□□ -0.12
CTSA-212ENST00000606394 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 IL17AQ16552 155 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 DDR2Q16832 855 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 MAP7D1Q3KQU3 841 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 SOWAHCQ53LP3 525 aaPredicted RBP14.31□□□□□ -0.12
CTSA-212ENST00000606394 EOGTQ5NDL2 527 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 SLFN12LQ6IEE8 588 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 BRAPQ7Z569 592 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 PDZD3Q86UT5 571 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 TMEFF1Q8IYR6 380 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 TMEM86AQ8N2M4 240 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 CCDC33Q8N5R6 958 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 ARL14EPQ8N8R7 260 aaPredicted RBP14.31□□□□□ -0.12
CTSA-212ENST00000606394 FUBP3Q96I24 572 aaKnown RBP eCLIP14.31□□□□□ -0.12
CTSA-212ENST00000606394 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 PCDHB6Q9Y5E3 794 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 BPTFQ12830 3046 aa14.31□□□□□ -0.12
CTSA-212ENST00000606394 KALRNO60229 2985 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 K7ENM7 598 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 SLC9A3R1O14745 358 aaPredicted RBP14.3□□□□□ -0.12
CTSA-212ENST00000606394 SLC26A4O43511 780 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 CFIP05156 583 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 CYP2F1P24903 491 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 ZNF131P52739 623 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 MYL7Q01449 175 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 ZRSR1Q15695 479 aaKnown RBP14.3□□□□□ -0.12
CTSA-212ENST00000606394 GAB4Q2WGN9 574 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 ARSHQ5FYA8 562 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 INTS6LQ5JSJ4 861 aaKnown RBP14.3□□□□□ -0.12
CTSA-212ENST00000606394 SLC39A4Q6P5W5 647 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 SLC36A4Q6YBV0 504 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 TTC30AQ86WT1 665 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 CHCHD4Q8N4Q1 142 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 ALLCQ8N6M5 410 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 IL17RCQ8NAC3 791 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 TXNDC5Q8NBS9 432 aaKnown RBP14.3□□□□□ -0.12
CTSA-212ENST00000606394 TTC16Q8NEE8 873 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 KCNV2Q8TDN2 545 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 RLN3Q8WXF3 142 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 PNMA5Q96PV4 448 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 PARVGQ9HBI0 331 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 CAPN10Q9HC96 672 aa14.3□□□□□ -0.12
CTSA-212ENST00000606394 BCCIPQ9P287 314 aaKnown RBP eCLIP14.3□□□□□ -0.12
CTSA-212ENST00000606394 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms