RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 RABGAP1LQ5R372 815 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 ICA1LQ8NDH6 482 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TRIM11Q96F44 468 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 UNC45AQ9H3U1 944 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 FETUBQ9UGM5 382 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 SLC16A4O15374 487 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TMEM63AO94886 807 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 GPC3P51654 580 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 CYLC2Q14093 348 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TCHHL1Q5QJ38 904 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TMC7Q7Z402 723 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 LZICQ8WZA0 190 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 CFBP00751 764 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 PMLP29590 882 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 MAP3K21Q5TCX8 1036 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 ZCCHC23Q6ZST2 131 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 IGDCC3Q8IVU1 814 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 PPIL6Q8IXY8 311 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 ZFP28Q8NHY6 868 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 GAB3Q8WWW8 586 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
CDCA3-212ENST00000604599 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 SLC13A1Q9BZW2 595 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 C20orf27Q9GZN8 174 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 KCND2Q9NZV8 630 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 APPL1Q9UKG1 709 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 PSMC5P62195 406 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 COG7P83436 770 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
CDCA3-212ENST00000604599 DRICH1Q6PGQ1 229 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-212ENST00000604599 TPTE2Q6XPS3 522 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 SPOCD1Q6ZMY3 1216 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 MKL1Q969V6 931 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 GPRC5CQ9NQ84 441 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 LZTS1Q9Y250 596 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 INPP5FQ9Y2H2 1132 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 SNCAIPQ9Y6H5 919 aa12.98□□□□□ -0.33
CDCA3-212ENST00000604599 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 TRIM49D1C9J1S8 452 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 SUPT3HO75486 399 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 SLC18A2Q05940 514 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 CBX3Q13185 183 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 PEX6Q13608 980 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 MYLK3Q32MK0 819 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 DENND5BQ6ZUT9 1274 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 SH2D5Q6ZV89 423 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 C7orf26Q96N11 449 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 ARHGEF38Q9NXL2 777 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 ZBTB21Q9ULJ3 1066 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 TDRKHQ9Y2W6 561 aaKnown RBP12.97□□□□□ -0.33
CDCA3-212ENST00000604599 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 KLF11O14901 512 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 IL1BP01584 269 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 PROCP04070 461 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 ELK3P41970 407 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 NRLP54845 237 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 EMP3P54852 163 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 YWHAGP61981 247 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDCA3-212ENST00000604599 BASP1P80723 227 aaKnown RBP12.97□□□□□ -0.33
CDCA3-212ENST00000604599 GPSM2P81274 684 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 GK3PQ14409 553 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 LMBRD2Q68DH5 695 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-212ENST00000604599 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 C12orf56Q8IXR9 622 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 PDIK1LQ8N165 341 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 NAT8LQ8N9F0 302 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 HSPBAP1Q96EW2 488 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 KIFC3Q9BVG8 833 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 C1orf21Q9H246 121 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 MRPL47Q9HD33 250 aaKnown RBP12.97□□□□□ -0.33
CDCA3-212ENST00000604599 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
CDCA3-212ENST00000604599 KBTBD13C9JR72 458 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 F8VP50 259 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 NDC80O14777 642 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 ITGAVP06756 1048 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 SERPINA6P08185 405 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 ARP10275 920 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 FDFT1P37268 417 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 PEX3P56589 373 aa12.96□□□□□ -0.33
CDCA3-212ENST00000604599 PLOD1Q02809 727 aaPredicted RBP12.96□□□□□ -0.33
CDCA3-212ENST00000604599 DCTN2Q13561 401 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms