RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 P4HA2O15460 535 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 AP1G2O75843 785 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 CCDC192P0DO97 292 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
CCDC12-209ENST00000604164 AMPD2Q01433 879 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 CAMK4Q16566 473 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 CCDC142Q17RM4 750 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 IER5LQ5T953 404 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 TXNDC8Q6A555 127 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 POTEHQ6S545 545 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 TMEM150AQ86TG1 271 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 EXOC4Q96A65 974 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 ZNF518BQ9C0D4 1074 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 FBXO44Q9H4M3 255 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 APOBEC3GQ9HC16 384 aaKnown RBP12.26□□□□□ -0.45
CCDC12-209ENST00000604164 TRPC7Q9HCX4 862 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 DACH1Q9UI36 760 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 NME7Q9Y5B8 376 aa12.26□□□□□ -0.45
CCDC12-209ENST00000604164 FAM170BA6NMN3 283 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 CLDN5O00501 218 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 CILPO75339 1184 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 CKMP06732 381 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 FAM200BP0CF97 657 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
CCDC12-209ENST00000604164 HDCP19113 662 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 BMP6P22004 513 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 YWHAQP27348 245 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 KPNA1P52294 538 aaPredicted RBP12.25□□□□□ -0.45
CCDC12-209ENST00000604164 SLC8A3P57103 927 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 UBXN2BQ14CS0 331 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 KIAA1958Q8N8K9 716 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 DTWD2Q8NBA8 298 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 HNRNPABQ99729 332 aaKnown RBP12.25□□□□□ -0.45
CCDC12-209ENST00000604164 DUSP9Q99956 384 aaKnown RBP12.25□□□□□ -0.45
CCDC12-209ENST00000604164 IER2Q9BTL4 223 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 PNPLA8Q9NP80 782 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 LTB4R2Q9NPC1 389 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 HEBP1Q9NRV9 189 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 RWDD2AQ9UIY3 292 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 PIAS3Q9Y6X2 628 aa12.25□□□□□ -0.45
CCDC12-209ENST00000604164 NCANO14594 1321 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 PI15O43692 258 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 PRAMEF12O95522 483 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 PRKCSHP14314 528 aaPredicted RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 TCF3P15923 654 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CD58P19256 250 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 RPS9P46781 194 aaKnown RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 FMO5P49326 533 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 MARSP56192 900 aaKnown RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 PDGFRLQ15198 375 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 ITPRIPL2Q3MIP1 535 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CBWD6Q4V339 395 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 RALGPS2Q86X27 583 aaPredicted RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 DDX42Q86XP3 938 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 FUKQ8N0W3 1084 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 PRSS33Q8NF86 280 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 FAM3CQ92520 227 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 SEMA4DQ92854 862 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 FBXO32Q969P5 355 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CYFIP2Q96F07 1278 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 TMEM176AQ96HP8 235 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 HEXIM2Q96MH2 286 aaKnown RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 IPO9Q96P70 1041 aaKnown RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 CSNK1G1Q9HCP0 422 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■■■■ 124.4
CCDC12-209ENST00000604164 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
CCDC12-209ENST00000604164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC12-209ENST00000604164 ZNF318Q5VUA4 2279 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 KMT2EQ8IZD2 1858 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 NUP210Q8TEM1 1887 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-209ENST00000604164 TRIOO75962 3097 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ZNF840PA6NDX5 716 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ARNTLO00327 626 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 TADA3O75528 432 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ABL1P00519 1130 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 CCDC130P13994 396 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 TUBP50607 506 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 SLC5A3P53794 718 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 STX17P56962 302 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 NHLH1Q02575 133 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 TAF10Q12962 218 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 CUL2Q13617 745 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 TPD52L1Q16890 204 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-209ENST00000604164 CT47A1Q5JQC4 288 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ATOH1Q92858 354 aaPredicted RBP12.23□□□□□ -0.45
CCDC12-209ENST00000604164 ELMO3Q96BJ8 720 aa12.23□□□□□ -0.45
CCDC12-209ENST00000604164 RSPRY1Q96DX4 576 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms