RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 CACHD1Q5VU97 1274 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 STKLD1Q8NE28 680 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 RSPH1Q8WYR4 309 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 SH3GL1Q99961 368 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 RHOBTB1O94844 696 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 VCAM1P19320 739 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 C1QBPQ07021 282 aaKnown RBP21.84■■□□□ 1.09
SH3D19-211ENST00000604030 WASHC5Q12768 1159 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 SYCP2LQ5T4T6 812 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 SPOCD1Q6ZMY3 1216 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 TMEM245Q9H330 911 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 ZNF70Q9UC06 446 aaPredicted RBP21.84■■□□□ 1.09
SH3D19-211ENST00000604030 SALL3Q9BXA9 1300 aa21.84■■□□□ 1.09
SH3D19-211ENST00000604030 SNTNA6NMZ2 147 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 RASA2Q15283 850 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 FAM182BQ5T319 152 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 VCPIP1Q96JH7 1222 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 GANQ9H2C0 597 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 CYP3A43Q9HB55 503 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 NMRK1Q9NWW6 199 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 POLIQ9UNA4 740 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 VWA5AO00534 786 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 UBOX5O94941 541 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 CHRNB3Q05901 458 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 NOTUMQ6P988 496 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 FAM118BQ9BPY3 351 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 GGA2Q9UJY4 613 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 PDE5AO76074 875 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 ALDH1A1P00352 501 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 TCN1P20061 433 aaPredicted RBP21.83■■□□□ 1.09
SH3D19-211ENST00000604030 AENQ8WTP8 325 aaKnown RBP21.83■■□□□ 1.09
SH3D19-211ENST00000604030 OTUD5Q96G74 571 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 TARS2Q9BW92 718 aaKnown RBP21.83■■□□□ 1.09
SH3D19-211ENST00000604030 TFR2Q9UP52 801 aa21.83■■□□□ 1.09
SH3D19-211ENST00000604030 ICAM1P05362 532 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 PMS1P54277 932 aaKnown RBP21.83■■□□□ 1.08
SH3D19-211ENST00000604030 ZNF571Q7Z3V5 609 aaPredicted RBP21.83■■□□□ 1.08
SH3D19-211ENST00000604030 TNFRSF8P28908 595 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 ERFP50548 548 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 TMEM120AQ9BXJ8 343 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 DDX20Q9UHI6 824 aaKnown RBP21.83■■□□□ 1.08
SH3D19-211ENST00000604030 LRCH1Q9Y2L9 728 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 RAD54BQ9Y620 910 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 DUSP10Q9Y6W6 482 aa21.83■■□□□ 1.08
SH3D19-211ENST00000604030 OVGP1Q12889 678 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 SEC23AQ15436 765 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 ZNF786Q8N393 782 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 PPP2R3CQ969Q6 453 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 RMND5AQ9H871 391 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 MAGEB16A2A368 324 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 SERPINI2O75830 405 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 ITGA4P13612 1032 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 CCDC60Q8IWA6 550 aaPredicted RBP21.82■■□□□ 1.08
SH3D19-211ENST00000604030 B4GALNT2Q8NHY0 566 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 SAR1AQ9NR31 198 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 NCAM2O15394 837 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 MED24O75448 989 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 OTUD4Q01804 1114 aaKnown RBP21.82■■□□□ 1.08
SH3D19-211ENST00000604030 CLEC16AQ2KHT3 1053 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 MARCH10Q8NA82 808 aaPredicted RBP21.82■■□□□ 1.08
SH3D19-211ENST00000604030 ZNF507Q8TCN5 953 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 VPS50Q96JG6 964 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 SLIT1O75093 1534 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 RIPK2O43353 540 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 GLI1P08151 1106 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 PRR5LQ6MZQ0 368 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 ZBED2Q9BTP6 218 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 PI4K2AQ9BTU6 479 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 GDF3Q9NR23 364 aa21.82■■□□□ 1.08
SH3D19-211ENST00000604030 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 PRR23D1E9PI22 279 aaPredicted RBP21.81■■□□□ 1.08
SH3D19-211ENST00000604030 CLPTM1O96005 669 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 PRR23D2P0DMB1 279 aaPredicted RBP21.81■■□□□ 1.08
SH3D19-211ENST00000604030 YTHDF3Q7Z739 585 aaKnown RBP21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ATP6V0D2Q8N8Y2 350 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 INPP5DQ92835 1189 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 FAM49BQ9NUQ9 324 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ARIH2O95376 493 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ANXA11P50995 505 aaKnown RBP21.81■■□□□ 1.08
SH3D19-211ENST00000604030 IL31Q6EBC2 164 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 PRMT9Q6P2P2 845 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 SNX31Q8N9S9 440 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 RFWD2Q8NHY2 731 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 NCKIPSDQ9NZQ3 722 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 GRAP2O75791 330 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 PDGFRBP09619 1106 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ATP6V1B1P15313 513 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 AKT1P31749 480 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 LAMC2Q13753 1193 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ITGA9Q13797 1035 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 NTRK3Q16288 839 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 ZNF333Q96JL9 665 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 TSC22D4Q9Y3Q8 395 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 DGKIO75912 1065 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 RGS2P41220 211 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 AQP5P55064 265 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 PLEKHM3Q6ZWE6 761 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 TMC3Q7Z5M5 1100 aa21.81■■□□□ 1.08
SH3D19-211ENST00000604030 CENPTQ96BT3 561 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms