RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 EXTL3O43909 919 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ADAM23O75077 832 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 USP1O94782 785 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 LYNP07948 512 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ZCCHC18P0CG32 403 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 HNRNPCL4P0DMR1 293 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GAP43P17677 238 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TATP17735 454 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TFEBP19484 476 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MSX1P28360 303 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 RGS2P41220 211 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 IARSP41252 1262 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PLS1Q14651 629 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CCDC6Q16204 474 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ARSJQ5FYB0 599 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 KIAA0319Q5VV43 1072 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 IL23RQ5VWK5 629 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 NXNQ6DKJ4 435 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 JMJD6Q6NYC1 403 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ZCCHC12Q6PEW1 402 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 Q6ZNX1 250 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ANO5Q75V66 913 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ST13P4Q8IZP2 240 aaPredicted RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TTC5Q8N0Z6 440 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 C10orf53Q8N6V4 93 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 OR52K2Q8NGK3 314 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 C1orf216Q8TAB5 229 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 GAB3Q8WWW8 586 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 KIAA1191Q96A73 305 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 COL26A1Q96A83 441 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 DYDC2Q96IM9 177 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ASB2Q96Q27 587 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 LRRC1Q9BTT6 524 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PACSIN1Q9BY11 444 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ACPTQ9BZG2 426 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 CD93Q9NPY3 652 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 KLHL11Q9NVR0 708 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 SELENONQ9NZV5 590 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 NDUFA13Q9P0J0 144 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 STOML1Q9UBI4 398 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 TBC1D29Q9UFV1 150 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ADGRE2Q9UHX3 823 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 AGO2Q9UKV8 859 aaKnown RBP4.94□□□□□ -1.62
LINC01109-201ENST00000603837 ATP11BQ9Y2G3 1177 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 BCL9O00512 1426 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 MST1RQ04912 1400 aa4.94□□□□□ -1.62
LINC01109-201ENST00000603837 PNMA6FA0A0J9YX94 578 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KMOO15229 486 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RNF113AO15541 343 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 IRAK2O43187 625 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KERAO60938 352 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 USP2O75604 605 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FAM13AO94988 1023 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 POP4O95707 220 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 OLFM2O95897 454 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 MT-CO1P00395 513 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CPA3P15088 417 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KRT4P19013 534 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TXKP42681 527 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CRKP46108 304 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CLCN4P51793 760 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 B2MP61769 119 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 DR1Q01658 176 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FKBP4Q02790 459 aaKnown RBP eCLIP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 DPYSQ14117 519 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ZNF267Q14586 743 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TRIM71Q2Q1W2 868 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KCTD21Q4G0X4 260 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 C1orf185Q5T7R7 199 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PAPD7Q5XG87 772 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PDZD4Q76G19 769 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 GPR155Q7Z3F1 870 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 LSMEM2Q8N112 164 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ARHGAP24Q8N264 748 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ENDOVQ8N8Q3 282 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ARRDC4Q8NCT1 418 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 CPLX3Q8WVH0 158 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 STK33Q9BYT3 514 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FAM129AQ9BZQ8 928 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KLHL4Q9C0H6 718 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 RUBCNLQ9H714 662 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 NTN4Q9HB63 628 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 VTA1Q9NP79 307 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ZDHHC3Q9NYG2 299 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 HACD3Q9P035 362 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 AASSQ9UDR5 926 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 GUCA1BQ9UMX6 200 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 FAF1Q9UNN5 650 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 COG5Q9UP83 839 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 TRIM33Q9UPN9 1127 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 SNX9Q9Y5X1 595 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 MROH7Q68CQ1 1323 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 EDC4Q6P2E9 1401 aaKnown RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 KIF28PB7ZC32 967 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 HIP1O00291 1037 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PDE2AO00408 941 aaPredicted RBP4.93□□□□□ -1.62
LINC01109-201ENST00000603837 S100A6P06703 90 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 ASGR2P07307 311 aa4.93□□□□□ -1.62
LINC01109-201ENST00000603837 PABPC4LP0CB38 370 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms