RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 USP39Q53GS9 565 aaKnown RBP8.9□□□□□ -0.98
CCDC9-206ENST00000601154 MDH1BQ5I0G3 518 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 PMS2CLQ68D20 193 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 DENND5BQ6ZUT9 1274 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 HS2ST1Q7LGA3 356 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 CYP2U1Q7Z449 544 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 FILIP1Q7Z7B0 1213 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 PDILTQ8N807 584 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 MDGA1Q8NFP4 955 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 USP33Q8TEY7 942 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 PIGKQ92643 395 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 FUBP3Q96I24 572 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCDC9-206ENST00000601154 HPDLQ96IR7 371 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 MMS19Q96T76 1030 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 OLFML3Q9NRN5 406 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 PANK4Q9NVE7 773 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 INTS13Q9NVM9 706 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 TRPM5Q9NZQ8 1165 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 EBF1Q9UH73 591 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 SRPRBQ9Y5M8 271 aaKnown RBP8.9□□□□□ -0.98
CCDC9-206ENST00000601154 CPQQ9Y646 472 aa8.9□□□□□ -0.98
CCDC9-206ENST00000601154 ATXN2Q99700 1313 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 F8VP50 259 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 K7EQS6 105 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 KHNYNO15037 678 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CLSTN1O94985 981 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 TOP3BO95985 862 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 HNRNPLP14866 589 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 TIE1P35590 1138 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 MAGEA11P43364 429 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 SLC6A11P48066 632 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CACNA2D1P54289 1103 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 SHC2P98077 582 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 MESP2Q0VG99 397 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 ALCAMQ13740 583 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 GAB4Q2WGN9 574 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 SH3PXD2AQ5TCZ1 1133 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 DAB2IPQ5VWQ8 1189 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 KIAA1211LQ6NV74 962 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 FAM171BQ6P995 826 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 VSTM1Q6UX27 236 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 TMEM92Q6UXU6 159 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CCDC73Q6ZRK6 1079 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 C12orf40Q86WS4 652 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 ALLCQ8N6M5 410 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 TXNDC5Q8NBS9 432 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 SPATA18Q8TC71 538 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 PCED1BQ96HM7 432 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 MRPL45Q9BRJ2 306 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 RNF38Q9H0F5 515 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 SNX25Q9H3E2 840 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 UPF2Q9HAU5 1272 aaKnown RBP8.89□□□□□ -0.99
CCDC9-206ENST00000601154 TMEM9BQ9NQ34 198 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CFAP97Q9P2B7 532 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CDH9Q9ULB4 789 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 MMP17Q9ULZ9 603 aa8.89□□□□□ -0.99
CCDC9-206ENST00000601154 CEP295Q9C0D2 2601 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 TCHHQ07283 1943 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 GREB1Q4ZG55 1949 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 FRMD3A2A2Y4 597 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 ZNF840PA6NDX5 716 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 ZNF233A6NK53 670 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 SGK1O00141 431 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 MAP3K13O43283 966 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 KLF8O95600 359 aaPredicted RBP8.88□□□□□ -0.99
CCDC9-206ENST00000601154 PROS1P07225 676 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DLATP10515 647 aaKnown RBP8.88□□□□□ -0.99
CCDC9-206ENST00000601154 MBL2P11226 248 aaPredicted RBP8.88□□□□□ -0.99
CCDC9-206ENST00000601154 WARSP23381 471 aaKnown RBP8.88□□□□□ -0.99
CCDC9-206ENST00000601154 MAPK8P45983 427 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 PDE6CP51160 858 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 IRX4P78413 519 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 TAF10Q12962 218 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 RESTQ13127 1097 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DHCR24Q15392 516 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 MAPRE1Q15691 268 aaKnown RBP8.88□□□□□ -0.99
CCDC9-206ENST00000601154 CRY1Q16526 586 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DUOXA2Q1HG44 320 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 EMC10Q5UCC4 262 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 UNQ6494/PRO21346Q6UXR6 183 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DPH6Q7L8W6 267 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 C11orf74Q86VG3 221 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 RASSF3Q86WH2 238 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 CCDC65Q8IXS2 484 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 TMEFF1Q8IYR6 380 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 PGBD3Q8N328 593 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 FRMD1Q8N878 549 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DEFB124Q8NES8 71 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 OR6B3Q8NGW1 331 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 CCDC26Q8TAB7 109 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 CCDC127Q96BQ5 260 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 SPATA17Q96L03 361 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 USP28Q96RU2 1077 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 ZNF518BQ9C0D4 1074 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 DPEP3Q9H4B8 488 aa8.88□□□□□ -0.99
CCDC9-206ENST00000601154 FOXD4L1Q9NU39 408 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms