RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 OLFML1Q6UWY5 402 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 SCUBE3Q8IX30 993 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 TMEM199Q8N511 208 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 KCTD13Q8WZ19 329 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 TMEM59LQ9UK28 342 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 ADAM28Q9UKQ2 775 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 TTC3P53804 2025 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 TET1Q8NFU7 2136 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 BRCA2P51587 3418 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 F8VP50 259 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 SYN3O14994 580 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 OAZ2O95190 189 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 TSPY1Q01534 308 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 CCDC142Q17RM4 750 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 SEL1L2Q5TEA6 688 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 LRRC38Q5VT99 294 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 MFSD5Q6N075 450 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 FAM35AQ86V20 835 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 LRRC43Q8N309 656 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 PKMYT1Q99640 499 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 UBXN6Q9BZV1 441 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 EFCAB14O75071 495 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 PYGMP11217 842 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 ITGB8P26012 769 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 SSR1P43307 286 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 SLC11A1P49279 550 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 TAS2R40P59535 323 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 CLEC20AQ6ZU45 233 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 PIGZQ86VD9 579 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 KRT82Q9NSB4 513 aa18.56■□□□□ 0.56
SHKBP1-224ENST00000600718 SPDYE4A6NLX3 237 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 AP1G2O75843 785 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 DGKIO75912 1065 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 UPP2O95045 317 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 FGGP02679 453 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 GALTP07902 379 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 LCP1P13796 627 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 GPD1P21695 349 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 ZNF143P52747 638 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 LONRF2Q1L5Z9 754 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 CCDC70Q6NSX1 233 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 EMC1Q8N766 993 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 OR10T2Q8NGX3 314 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 SMARCD1Q96GM5 515 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 RBM12Q9NTZ6 932 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 ASNSD1Q9NWL6 643 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 C2CD4BA6NLJ0 364 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 AMHP03971 560 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 CSF2RAP15509 400 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 MAP3K7CLP57077 242 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 ARCQ7LC44 396 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 KATNAL2Q8IYT4 538 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 TOP1MTQ969P6 601 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 MYLPFQ96A32 169 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 CNPY3Q9BT09 278 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 MCOLN1Q9GZU1 580 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 LRRC4Q9HBW1 653 aa18.55■□□□□ 0.56
SHKBP1-224ENST00000600718 CCDC188H7C350 402 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 KRIT1O00522 736 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 BEST1O76090 585 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 PDGFRAP16234 1089 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 EFHC1Q5JVL4 640 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 DAB2IPQ5VWQ8 1189 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 SLC26A9Q7LBE3 791 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 RXFP2Q8WXD0 754 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 SMOQ99835 787 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 CSNK1G1Q9HCP0 422 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 MARCH5Q9NX47 278 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 SF3B1O75533 1304 aaKnown RBP eCLIP18.54■□□□□ 0.566e-8■■■■■ 58.8
SHKBP1-224ENST00000600718 TSC2P49815 1807 aa18.54■□□□□ 0.56
SHKBP1-224ENST00000600718 DPYSL4O14531 572 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 RNF8O76064 485 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 HADHQ16836 314 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 GLE1Q53GS7 698 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 UBE2Q1Q7Z7E8 422 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 LRRTM3Q86VH5 581 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 DCP1BQ8IZD4 617 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 EXD1Q8NHP7 514 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 PIWIL1Q96J94 861 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 DDX56Q9NY93 547 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 ZRANB2O95218 330 aaKnown RBP eCLIP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 TUBBP07437 444 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 RHOXF2BP0C7M4 288 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 DESP17661 470 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 FGFR3P22607 806 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 BCAR1P56945 870 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 GABPB1Q06547 395 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 VARS2Q5ST30 1063 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 FAM171A1Q5VUB5 890 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 AADACL2Q6P093 401 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 C4orf50Q6ZRC1 276 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 POLNQ7Z5Q5 900 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 RCOR2Q8IZ40 523 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 TMEM209Q96SK2 561 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 NCAPGQ9BPX3 1015 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 RHOXF2Q9BQY4 288 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms