RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 ZFP14Q9HCL3 533 aa13.77□□□□□ -0.21
SRRM1-223ENST00000600523 PNPLA8Q9NP80 782 aa13.77□□□□□ -0.21
SRRM1-223ENST00000600523 DNAJC12Q9UKB3 198 aa13.77□□□□□ -0.21
SRRM1-223ENST00000600523 SORCS3Q9UPU3 1222 aa13.77□□□□□ -0.21
SRRM1-223ENST00000600523 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 LRRC10BA6NIK2 292 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 DLL1O00548 723 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 ABL1P00519 1130 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 ZNF18P17022 549 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 HMGA1P17096 107 aaKnown RBP13.76□□□□□ -0.21
SRRM1-223ENST00000600523 AVPR1AP37288 418 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 BCAT1P54687 386 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 PTK2Q05397 1052 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 RAPGEF1Q13905 1077 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 GOLGA7BQ2TAP0 167 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 GPR158Q5T848 1215 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 PPP1R26Q5T8A7 1209 aaPredicted RBP13.76□□□□□ -0.21
SRRM1-223ENST00000600523 UBALD2Q8IYN6 164 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 SMARCD2Q92925 531 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 KCNK16Q96T55 309 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 LRRC3Q9BY71 257 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 CBX8Q9HC52 389 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 CSNK1G1Q9HCP0 422 aa13.76□□□□□ -0.21
SRRM1-223ENST00000600523 ZNF334Q9HCZ1 680 aaPredicted RBP13.76□□□□□ -0.21
SRRM1-223ENST00000600523 DCXO43602 365 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 SETSIPP0DME0 302 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 GJA1P17302 382 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 PFKLP17858 780 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
SRRM1-223ENST00000600523 CCR2P41597 374 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 SLC5A3P53794 718 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 BST2Q10589 180 aaKnown RBP13.75□□□□□ -0.21
SRRM1-223ENST00000600523 TDGQ13569 410 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 KLHDC7AQ5VTJ3 777 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 CLEC20AQ6ZU45 233 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 GAREM2Q75VX8 874 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 FMNL3Q8IVF7 1028 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 YAF2Q8IY57 180 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 UBR7Q8N806 425 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 ZSCAN18Q8TBC5 510 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-223ENST00000600523 KAT5Q92993 513 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 FBXO32Q969P5 355 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 KREMEN1Q96MU8 473 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 TTLL2Q9BWV7 592 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 TSPAN16Q9UKR8 245 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 XIRP2A4UGR9 3374 aa13.75□□□□□ -0.21
SRRM1-223ENST00000600523 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 THAP12O43422 761 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 ECI2O75521 394 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 UCHL3P15374 230 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 GNA15P30679 374 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 CACNA2D1P54289 1103 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 SNX16P57768 344 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 TAF10Q12962 218 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 IQCB1Q15051 598 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 SYCP1Q15431 976 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 CNGA2Q16280 664 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 CACNA2D4Q7Z3S7 1137 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 LUZP1Q86V48 1076 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 MON1AQ86VX9 555 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 ARHGAP18Q8N392 663 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 SHC3Q92529 594 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 ELSPBP1Q96BH3 223 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 ASB16Q96NS5 453 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 NOX5Q96PH1 765 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 SPAG5Q96R06 1193 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 SMOQ99835 787 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 STK33Q9BYT3 514 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 NACA2Q9H009 215 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 PDCL3Q9H2J4 239 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 IL21Q9HBE4 155 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 TLR8Q9NR97 1041 aaKnown RBP13.74□□□□□ -0.21
SRRM1-223ENST00000600523 FAM207AQ9NSI2 230 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-223ENST00000600523 MUTYHQ9UIF7 546 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
SRRM1-223ENST00000600523 NCANO14594 1321 aa13.73□□□□□ -0.21
SRRM1-223ENST00000600523 ANHXE9PGG2 379 aa13.73□□□□□ -0.21
SRRM1-223ENST00000600523 M0QYV0 167 aa13.73□□□□□ -0.21
SRRM1-223ENST00000600523 O00370 1275 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms