RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 DPP7Q9UHL4 492 aa21.17■□□□□ 0.98
SHKBP1-222ENST00000600320 CCDC195A0A1B0GUA6 201 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 SPDYE4A6NLX3 237 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 TRIM66O15016 1216 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 PAPLNO95428 1278 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 HNRNPA1P09651 372 aaKnown RBP eCLIP21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 SRGAP2BP0DMP2 458 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 HNRNPH3P31942 346 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 GPD2P43304 727 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 CDR2Q01850 454 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 BST2Q10589 180 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 WDR59Q6PJI9 974 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 TMC5Q6UXY8 1006 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 RTL10Q7L3V2 364 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 GPRIN1Q7Z2K8 1008 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 ZNF571Q7Z3V5 609 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 PIGZQ86VD9 579 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 WDTC1Q8N5D0 677 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 CMASQ8NFW8 434 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 PCDHB18PQ96TA0 734 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 AGPAT1Q99943 283 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 PRKD2Q9BZL6 878 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 HAUS4Q9H6D7 363 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 ABHD10Q9NUJ1 306 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 CYTH4Q9UIA0 394 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 CDH22Q9UJ99 828 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 MYH10P35580 1976 aa21.16■□□□□ 0.98
SHKBP1-222ENST00000600320 FAM170AA1A519 330 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 SLC38A8A6NNN8 435 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 XPO1O14980 1071 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 GABBR2O75899 941 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 PLEKP08567 350 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 CCDC172P0C7W6 258 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 ANXA13P27216 316 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 KLHL30Q0D2K2 578 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 PLD1Q13393 1074 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 SKIV2LQ15477 1246 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 MEA1Q16626 185 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 ELMSAN1Q6PJG2 1045 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 ZNF677Q86XU0 584 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 FMNL3Q8IVF7 1028 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 C1orf131Q8NDD1 294 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 SLC35F5Q8WV83 523 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 MSLNLQ96KJ4 702 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 SPATA17Q96L03 361 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 S1PR5Q9H228 398 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 HCFC1R1Q9NWW0 138 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 PATJQ8NI35 1801 aa21.15■□□□□ 0.98
SHKBP1-222ENST00000600320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 TNFRSF10BO14763 440 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 SETSIPP0DME0 302 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 HMGA1P17096 107 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 RGS7P49802 495 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 EPHB3P54753 998 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 USP46P62068 366 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 PMF1Q6P1K2 205 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 DNAJB7Q7Z6W7 309 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 CNGA4Q8IV77 575 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 HS6ST3Q8IZP7 471 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 MAFAQ8NHW3 353 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 LHX5Q9H2C1 402 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 PDCL3Q9H2J4 239 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 UBE2ZQ9H832 354 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 ZNF334Q9HCZ1 680 aaPredicted RBP21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 ARHGAP20Q9P2F6 1191 aa21.14■□□□□ 0.97
SHKBP1-222ENST00000600320 SERPING1P05155 500 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 POU2F2P09086 479 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 HOXB8P17481 243 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 CDH5P33151 784 aaPredicted RBP21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 PLA2G4AP47712 749 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 SLC5A3P53794 718 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 NTHL1P78549 312 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 VEPH1Q14D04 833 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 CLUL1Q15846 466 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 SCAMP5Q8TAC9 235 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 SMG7Q92540 1137 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 PSMG2Q969U7 264 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 LRRC3Q9BY71 257 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 UBXN6Q9BZV1 441 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 IMPACTQ9P2X3 320 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 DNMT3BQ9UBC3 853 aaKnown RBP21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 GREB1Q4ZG55 1949 aa21.13■□□□□ 0.97
SHKBP1-222ENST00000600320 DOCK6Q96HP0 2047 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 H3BQ06 376 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 DDX3XO00571 662 aaKnown RBP eCLIP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 CYP1A1P04798 512 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 TNFAIP3P21580 790 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 NOMO3P69849 1222 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 IFRD2Q12894 506 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 TDRD12Q587J7 1177 aaKnown RBP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 DENND5BQ6ZUT9 1274 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 GPR149Q86SP6 731 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 TMC8Q8IU68 726 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 NUP93Q8N1F7 819 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 ZNF512Q96ME7 567 aaPredicted RBP21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 CHP1Q99653 195 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 PNPLA8Q9NP80 782 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 PRDM6Q9NQX0 595 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 TJP2Q9UDY2 1190 aa21.12■□□□□ 0.97
SHKBP1-222ENST00000600320 MAGED2Q9UNF1 606 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms