RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
UPF1-209ENST00000600310 TSPAN16Q9UKR8 245 aa20.48■□□□□ 0.87
UPF1-209ENST00000600310 ZNF197O14709 1029 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 CALCAP01258 141 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 TPM3P06753 285 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 GNA15P30679 374 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 PTK2Q05397 1052 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 PKDCCQ504Y2 493 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 PRSS36Q5K4E3 855 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 DENND5BQ6ZUT9 1274 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 TTC30AQ86WT1 665 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 NUP93Q8N1F7 819 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 STKLD1Q8NE28 680 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 TRMT2BQ96GJ1 504 aaKnown RBP20.47■□□□□ 0.87
UPF1-209ENST00000600310 XPO4Q9C0E2 1151 aaKnown RBP20.47■□□□□ 0.87
UPF1-209ENST00000600310 PNPLA8Q9NP80 782 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 ACP6Q9NPH0 428 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 HESX1Q9UBX0 185 aa20.47■□□□□ 0.87
UPF1-209ENST00000600310 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.47■□□□□ 0.87
UPF1-209ENST00000600310 MRPS23Q9Y3D9 190 aaKnown RBP20.47■□□□□ 0.87
UPF1-209ENST00000600310 HHLA1C9JL84 531 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 CBFA2T2O43439 604 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 MICAL2O94851 1124 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 FGF19O95750 216 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 MYL4P12829 197 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 CLCN1P35523 988 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 CCR2P41597 374 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 BCAT1P54687 386 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 BPIFB4P59827 614 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 SLC5A9Q2M3M2 681 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 TJAP1Q5JTD0 557 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 ITFG1Q8TB96 612 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 ZNF606Q8WXB4 792 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 SPAG5Q96R06 1193 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 TTLL2Q9BWV7 592 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 UBXN6Q9BZV1 441 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 IL21Q9HBE4 155 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 EHD2Q9NZN4 543 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 UXTQ9UBK9 157 aaPredicted RBP20.46■□□□□ 0.87
UPF1-209ENST00000600310 PRKAG3Q9UGI9 489 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 MAGED2Q9UNF1 606 aaPredicted RBP20.46■□□□□ 0.87
UPF1-209ENST00000600310 USTQ9Y2C2 406 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 PTPRDP23468 1912 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 TTC28Q96AY4 2481 aa20.46■□□□□ 0.87
UPF1-209ENST00000600310 TNFRSF10BO14763 440 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 THAP12O43422 761 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 MED7O43513 233 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 MOSPD3O75425 235 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 SOX5P35711 763 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 STAT1P42224 750 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 SLC8A3P57103 927 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 MEA1Q16626 185 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 FIGNQ5HY92 759 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 SARM1Q6SZW1 724 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 CACNA2D4Q7Z3S7 1137 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 SLC47A2Q86VL8 602 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 UBA3Q8TBC4 463 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 TCEAL4Q96EI5 215 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 NUP58Q9BVL2 599 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 COMMD8Q9NX08 183 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.45■□□□□ 0.86
UPF1-209ENST00000600310 IL37Q9NZH6 218 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 C2orf16Q68DN1 1984 aa20.45■□□□□ 0.86
UPF1-209ENST00000600310 REV3LO60673 3130 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 XPO1O14980 1071 aaKnown RBP20.44■□□□□ 0.86
UPF1-209ENST00000600310 RTN3O95197 1032 aaPredicted RBP20.44■□□□□ 0.86
UPF1-209ENST00000600310 F11P03951 625 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 SETSIPP0DME0 302 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 GABRR2P28476 465 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 CDC25CP30307 473 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 SLC5A3P53794 718 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 USP46P62068 366 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 PDE4CQ08493 712 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 BST2Q10589 180 aaKnown RBP20.44■□□□□ 0.86
UPF1-209ENST00000600310 GAREM2Q75VX8 874 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 GET4Q7L5D6 327 aaPredicted RBP20.44■□□□□ 0.86
UPF1-209ENST00000600310 OTOP3Q7RTS5 596 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 PIGZQ86VD9 579 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 ADHFE1Q8IWW8 467 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 SHKBP1Q8TBC3 707 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 EDEM3Q9BZQ6 932 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 TTYH3Q9C0H2 523 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 MYO6Q9UM54 1294 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 MUC3AQ02505 3323 aa20.44■□□□□ 0.86
UPF1-209ENST00000600310 M0QYV0 167 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 NRG2O14511 850 aaPredicted RBP20.43■□□□□ 0.86
UPF1-209ENST00000600310 CYP11B1P15538 503 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 TMEM150AQ86TG1 271 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 SCAMP5Q8TAC9 235 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 SLC35F5Q8WV83 523 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 BAP1Q92560 729 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 FGF13Q92913 245 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 MYADMQ96S97 322 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 ATXN3LQ9H3M9 355 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 CDH7Q9ULB5 785 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 NR2E1Q9Y466 385 aa20.43■□□□□ 0.86
UPF1-209ENST00000600310 A0A1W2PRU2 124 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 FAM92AA1XBS5 289 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 GFPT2O94808 682 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 GJA1P17302 382 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms