RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 DDX3XO00571 662 aaKnown RBP eCLIP13.37□□□□□ -0.273e-8■■■■■ 34.7
CHMP2A-206ENST00000600118 TNFRSF10BO14763 440 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 XPO1O14980 1071 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 NCK2O43639 380 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 GABBR2O75899 941 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 LSM8O95777 96 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 HNRNPA1P09651 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 ANXA13P27216 316 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 GRIK1P39086 918 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 PLA2G4AP47712 749 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 GSDMDP57764 484 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 TWF1Q12792 350 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 PLD1Q13393 1074 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 DDR2Q16832 855 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 PASD1Q8IV76 773 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 SCN4BQ8IWT1 228 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 CMASQ8NFW8 434 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 KCTD13Q8WZ19 329 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 CHP1Q99653 195 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
CHMP2A-206ENST00000600118 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 RFPL2O75678 378 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 FOSL2P15408 326 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC8A3P57103 927 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 NOMO3P69849 1222 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 PDCLQ13371 301 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 CLEC16AQ2KHT3 1053 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 TDRD12Q587J7 1177 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 RAB41Q5JT25 222 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 PPM1LQ5SGD2 360 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 SDHAF4Q5VUM1 108 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 ANKRD54Q6NXT1 300 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 PMF1Q6P1K2 205 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 ELMSAN1Q6PJG2 1045 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 CCDC186Q7Z3E2 898 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 TMEM35BQ8NCS4 154 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 ZNF707Q96C28 371 aaPredicted RBP13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 PABPC5Q96DU9 382 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 HSFY1Q96LI6 401 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC4A5Q9BY07 1137 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 CLEC1BQ9P126 229 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 NENFQ9UMX5 172 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 PLXNA3P51805 1871 aa13.36□□□□□ -0.27
CHMP2A-206ENST00000600118 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 FAM92AA1XBS5 289 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC38A8A6NNN8 435 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 LTBRP36941 435 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 EIF4A3P38919 411 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 SLC5A3P53794 718 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 EPHB3P54753 998 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 CENPCQ03188 943 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 GPRIN1Q7Z2K8 1008 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 GPR152Q8TDT2 470 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 MYRFLQ96LU7 910 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 SFXN1Q9H9B4 322 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 CYLDQ9NQC7 956 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 COMMD8Q9NX08 183 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 ADAMTS1Q9UHI8 967 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 USP3Q9Y6I4 520 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 SZT2Q5T011 3432 aa13.35□□□□□ -0.27
CHMP2A-206ENST00000600118 A0A087X0T9 212 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 TBX10O75333 385 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 LRG1P02750 347 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 FAM228BP0C875 321 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 CSH1P0DML2 217 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 CSH2P0DML3 217 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 GZMAP12544 262 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 MMP8P22894 467 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 RGS7P49802 495 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 KIF11P52732 1056 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 USP46P62068 366 aa13.34□□□□□ -0.27
CHMP2A-206ENST00000600118 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms