RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 LRRC27Q9C0I9 530 aa22.62■■□□□ 1.21
PNKP-212ENST00000599454 PLXND1Q9Y4D7 1925 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 ATP2C2O75185 946 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 LMO2P25791 158 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 DGKEP52429 567 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 PSMC1P62191 440 aaKnown RBP22.61■■□□□ 1.21
PNKP-212ENST00000599454 CEBPZQ03701 1054 aaKnown RBP22.61■■□□□ 1.21
PNKP-212ENST00000599454 SLC39A14Q15043 492 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 USP39Q53GS9 565 aaKnown RBP22.61■■□□□ 1.21
PNKP-212ENST00000599454 LMBRD2Q68DH5 695 aaPredicted RBP22.61■■□□□ 1.21
PNKP-212ENST00000599454 WDR49Q8IV35 697 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 TTLL2Q9BWV7 592 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 LINC00597Q9H2U6 94 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 CRTAC1Q9NQ79 661 aa22.61■■□□□ 1.21
PNKP-212ENST00000599454 PTPRJQ12913 1337 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 MYH10P35580 1976 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 BCLAF3A2AJT9 711 aaKnown RBP22.6■■□□□ 1.21
PNKP-212ENST00000599454 CAVIN2O95810 425 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 FAM163BP0C2L3 166 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 BDNFP23560 247 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 NOP14P78316 857 aaKnown RBP22.6■■□□□ 1.21
PNKP-212ENST00000599454 CYP27A1Q02318 531 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 CREB5Q02930 508 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 MYCBPAPQ8TBZ2 947 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 USP33Q8TEY7 942 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 PANK2Q9BZ23 570 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 TNMDQ9H2S6 317 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 SMOC1Q9H4F8 434 aa22.6■■□□□ 1.21
PNKP-212ENST00000599454 GON4LQ3T8J9 2241 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 A0A087X0B3 334 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 LEFTY2O00292 366 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 SLC9A3R1O14745 358 aaPredicted RBP22.59■■□□□ 1.21
PNKP-212ENST00000599454 KCNK5O95279 499 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 SYT1P21579 422 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 GBP1P32455 592 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 OPRD1P41143 372 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 SLC7A9P82251 487 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 FAM173BQ6P4H8 233 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 RASSF3Q86WH2 238 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 CBWD2Q8IUF1 395 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 PCED1BQ96HM7 432 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 CNOT6LQ96LI5 555 aaKnown RBP22.59■■□□□ 1.21
PNKP-212ENST00000599454 C8orf48Q96LL4 319 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 MMS19Q96T76 1030 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 EDEM2Q9BV94 578 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 HSPBP1Q9NZL4 362 aa22.59■■□□□ 1.21
PNKP-212ENST00000599454 CEP295Q9C0D2 2601 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 DCLK1O15075 740 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 EIF3DO15371 548 aaKnown RBP eCLIP22.58■■□□□ 1.21
PNKP-212ENST00000599454 PDGFRBP09619 1106 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 PMS2CLQ68D20 193 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 TCEAL6Q6IPX3 200 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 TRAPPC11Q7Z392 1133 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 TCEAL3Q969E4 200 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 USP28Q96RU2 1077 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 SNX25Q9H3E2 840 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 CUEDC2Q9H467 287 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 MMP17Q9ULZ9 603 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 CEP192Q8TEP8 1941 aa22.58■■□□□ 1.21
PNKP-212ENST00000599454 TNRC6BQ9UPQ9 1833 aaKnown RBP22.57■■□□□ 1.2
PNKP-212ENST00000599454 ASCC3Q8N3C0 2202 aaKnown RBP22.57■■□□□ 1.2
PNKP-212ENST00000599454 ZNF840PA6NDX5 716 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 K7EQS6 105 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 TACC1O75410 805 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 OLFM2O95897 454 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 GNL1P36915 607 aaPredicted RBP22.57■■□□□ 1.2
PNKP-212ENST00000599454 USP46P62068 366 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 MRPS21P82921 87 aaKnown RBP22.57■■□□□ 1.2
PNKP-212ENST00000599454 ZXDBP98169 803 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 DDX42Q86XP3 938 aaKnown RBP eCLIP22.57■■□□□ 1.2
PNKP-212ENST00000599454 PDILTQ8N807 584 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 ZSCAN16Q9H4T2 348 aaPredicted RBP22.57■■□□□ 1.2
PNKP-212ENST00000599454 KBTBD4Q9NVX7 518 aa22.57■■□□□ 1.2
PNKP-212ENST00000599454 F8VP50 259 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 CYP17A1P05093 508 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 EIF2DP41214 584 aaKnown RBP22.56■■□□□ 1.2
PNKP-212ENST00000599454 SNRPFP62306 86 aaKnown RBP22.56■■□□□ 1.2
PNKP-212ENST00000599454 AMPD3Q01432 767 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 GAB4Q2WGN9 574 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 HSF5Q4G112 596 aaPredicted RBP22.56■■□□□ 1.2
PNKP-212ENST00000599454 C2orf27AQ580R0 203 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 MDH1BQ5I0G3 518 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 DAB2IPQ5VWQ8 1189 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 TDRD10Q5VZ19 366 aaKnown RBP22.56■■□□□ 1.2
PNKP-212ENST00000599454 FILIP1Q7Z7B0 1213 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 SLITRK1Q96PX8 696 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 ELOVL4Q9GZR5 314 aa22.56■■□□□ 1.2
PNKP-212ENST00000599454 ALDH1A2O94788 518 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 OAS1P00973 400 aaKnown RBP22.55■■□□□ 1.2
PNKP-212ENST00000599454 NASPP49321 788 aaPredicted RBP22.55■■□□□ 1.2
PNKP-212ENST00000599454 SEC13P55735 322 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 CRY1Q16526 586 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 SNRNP35Q16560 246 aaKnown RBP22.55■■□□□ 1.2
PNKP-212ENST00000599454 ANO7Q6IWH7 933 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 HS2ST1Q7LGA3 356 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 ADGRG2Q8IZP9 1017 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 GLIS3Q8NEA6 775 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 ZNF507Q8TCN5 953 aa22.55■■□□□ 1.2
PNKP-212ENST00000599454 INTS4Q96HW7 963 aaKnown RBP22.55■■□□□ 1.2
PNKP-212ENST00000599454 FNBP1Q96RU3 617 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms