RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CCDC142Q17RM4 750 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 PLEKHG6Q3KR16 790 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 TTC38Q5R3I4 469 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 RABEPKQ7Z6M1 372 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
LIG1-214ENST00000597146 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 PIP4K2CQ8TBX8 421 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 LRRC15Q8TF66 581 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 BICD1Q96G01 975 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 TRMT2BQ96GJ1 504 aaKnown RBP16.65■□□□□ 0.26
LIG1-214ENST00000597146 TMX3Q96JJ7 454 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
LIG1-214ENST00000597146 DSEQ9UL01 958 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
LIG1-214ENST00000597146 A0A087WV48 116 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 CBFA2T3O75081 653 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 GABRG2P18507 467 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 SMARCB1Q12824 385 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 KCNB1Q14721 858 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 TMPRSS7Q7RTY8 843 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 TRIML1Q8N9V2 468 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 ERLEC1Q96DZ1 483 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 DCBLD2Q96PD2 775 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 RPF1Q9H9Y2 349 aaKnown RBP16.64■□□□□ 0.25
LIG1-214ENST00000597146 PCOLCE2Q9UKZ9 415 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 ARHGAP26Q9UNA1 814 aa16.64■□□□□ 0.25
LIG1-214ENST00000597146 TMEM131Q92545 1883 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 IGHV1OR15-9A0A0B4J2B8 117 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 LEFTY2O00292 366 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 APODP05090 189 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 TCF3P15923 654 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 CYP2F1P24903 491 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 ABCG1P45844 678 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 GRIK2Q13002 908 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 HSF5Q4G112 596 aaPredicted RBP16.63■□□□□ 0.25
LIG1-214ENST00000597146 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
LIG1-214ENST00000597146 SLC36A4Q6YBV0 504 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 GLRX5Q86SX6 157 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 SCUBE3Q8IX30 993 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 PNMA5Q96PV4 448 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 PNKPQ96T60 521 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 NTPCRQ9BSD7 190 aaKnown RBP16.63■□□□□ 0.25
LIG1-214ENST00000597146 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 CD93Q9NPY3 652 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 TOR4AQ9NXH8 423 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 LRWD1Q9UFC0 647 aa16.63■□□□□ 0.25
LIG1-214ENST00000597146 A0A1W2PQD8 194 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 TRABD2BA6NFA1 517 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 MYMKA6NI61 221 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 PP2D1A8MPX8 630 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 ATXN7O15265 892 aaPredicted RBP16.62■□□□□ 0.25
LIG1-214ENST00000597146 ADRB2P07550 413 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 PLS3P13797 630 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 HDCP19113 662 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 GJB2P29033 226 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 TRAPPC10P48553 1259 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 TAF6P49848 677 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
LIG1-214ENST00000597146 TSPY1Q01534 308 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 RESTQ13127 1097 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 ORC2Q13416 577 aaPredicted RBP16.62■□□□□ 0.25
LIG1-214ENST00000597146 TMEM132DQ14C87 1099 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 DHCR24Q15392 516 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 ARHGEF4Q9NR80 690 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 CYP8B1Q9UNU6 501 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 RAI2Q9Y5P3 530 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 ATMQ13315 3056 aa16.62■□□□□ 0.25
LIG1-214ENST00000597146 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 OGTO15294 1046 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 PAX3P23760 479 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 ACAT1P24752 427 aaKnown RBP16.61■□□□□ 0.25
LIG1-214ENST00000597146 LIG4P49917 911 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 RPL10AP62906 217 aaKnown RBP16.61■□□□□ 0.25
LIG1-214ENST00000597146 ATP2C1P98194 919 aaPredicted RBP16.61■□□□□ 0.25
LIG1-214ENST00000597146 ZNF605Q86T29 641 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 RGL4Q8IZJ4 473 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 SETD7Q8WTS6 366 aaKnown RBP16.61■□□□□ 0.25
LIG1-214ENST00000597146 RAB34Q9BZG1 259 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 IL21RQ9HBE5 538 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 DNM3Q9UQ16 869 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 MGAQ8IWI9 3026 aa16.61■□□□□ 0.25
LIG1-214ENST00000597146 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 TK2O00142 265 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 HNRNPDLO14979 420 aaKnown RBP16.6■□□□□ 0.25
LIG1-214ENST00000597146 ATXN1LP0C7T5 689 aaKnown RBP16.6■□□□□ 0.25
LIG1-214ENST00000597146 MAOBP27338 520 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 ITPKBP27987 946 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 WASP42768 502 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 CAMK2BQ13554 666 aa16.6■□□□□ 0.25
LIG1-214ENST00000597146 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms