RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
SMCO4-206ENST00000596676 MAFFQ9ULX9 164 aa16.41■□□□□ 0.22
SMCO4-206ENST00000596676 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
SMCO4-206ENST00000596676 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
SMCO4-206ENST00000596676 DAAM1Q9Y4D1 1078 aa16.41■□□□□ 0.22
SMCO4-206ENST00000596676 ATP8B3O60423 1300 aa16.41■□□□□ 0.22
SMCO4-206ENST00000596676 TNFRSF10BO14763 440 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
SMCO4-206ENST00000596676 GJA1P17302 382 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
SMCO4-206ENST00000596676 ZBED6P86452 979 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 GPR149Q86SP6 731 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 NDRG1Q92597 394 aaKnown RBP16.4■□□□□ 0.22
SMCO4-206ENST00000596676 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 TCEAL4Q96EI5 215 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 C8orf48Q96LL4 319 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 LRRC3Q9BY71 257 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
SMCO4-206ENST00000596676 ZDHHC7Q9NXF8 308 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 AIPL1Q9NZN9 384 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 HSFX1Q9UBD0 423 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 TJP2Q9UDY2 1190 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 CD207Q9UJ71 328 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
SMCO4-206ENST00000596676 GREB1Q4ZG55 1949 aa16.4■□□□□ 0.22
SMCO4-206ENST00000596676 PLEKP08567 350 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-206ENST00000596676 HNRNPA1P09651 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMCO4-206ENST00000596676 SRGAP2BP0DMP2 458 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 FERP16591 822 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 HOXA9P31269 272 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 CCR2P41597 374 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 GPD2P43304 727 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PGFP49763 221 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PDE6CP51160 858 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 BPIFB4P59827 614 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 FMO1Q01740 532 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PLD1Q13393 1074 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 ARID5BQ14865 1188 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 POTEHQ6S545 545 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PIGZQ86VD9 579 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 DNAAF5Q86Y56 855 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 TMC8Q8IU68 726 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PSMG2Q969U7 264 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 SPATA17Q96L03 361 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 ZNF512Q96ME7 567 aaPredicted RBP16.39■□□□□ 0.21
SMCO4-206ENST00000596676 ADAM7Q9H2U9 754 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 PIDD1Q9HB75 910 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
SMCO4-206ENST00000596676 COL6A3P12111 3177 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 TRIM66O15016 1216 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 MED7O43513 233 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 MFAP3LO75121 409 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 RHOP08100 348 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 MYL4P12829 197 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-206ENST00000596676 ANXA13P27216 316 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 SLC5A3P53794 718 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 BCAT1P54687 386 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 SLC5A9Q2M3M2 681 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 HGSNATQ68CP4 663 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 WDR59Q6PJI9 974 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 ZNF571Q7Z3V5 609 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-206ENST00000596676 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 SMRP1Q8NCR6 262 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 C1orf131Q8NDD1 294 aaKnown RBP16.38■□□□□ 0.21
SMCO4-206ENST00000596676 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-206ENST00000596676 SLC35F5Q8WV83 523 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 AGPAT1Q99943 283 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 SYT11Q9BT88 431 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 HAUS4Q9H6D7 363 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 MYO6Q9UM54 1294 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 USP15Q9Y4E8 981 aaPredicted RBP16.38■□□□□ 0.21
SMCO4-206ENST00000596676 PATJQ8NI35 1801 aa16.38■□□□□ 0.21
SMCO4-206ENST00000596676 ZNF638Q14966 1978 aaKnown RBP16.37■□□□□ 0.21
SMCO4-206ENST00000596676 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-206ENST00000596676 XPO1O14980 1071 aaKnown RBP16.37■□□□□ 0.21
SMCO4-206ENST00000596676 XYLBO75191 536 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 MOSPD3O75425 235 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 PAPLNO95428 1278 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 LCP1P13796 627 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 PTPN2P17706 415 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 CDR2Q01850 454 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 GSE1Q14687 1217 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 VEPH1Q14D04 833 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 STILQ15468 1287 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 C2CD6Q53TS8 623 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 TMEM150AQ86TG1 271 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 NUP93Q8N1F7 819 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 TC2NQ8N9U0 490 aa16.37■□□□□ 0.21
SMCO4-206ENST00000596676 ZNF397Q8NF99 534 aaPredicted RBP16.37■□□□□ 0.21
SMCO4-206ENST00000596676 ITFG1Q8TB96 612 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms