RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 UBE2Q2Q8WVN8 375 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 CD101Q93033 1021 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 PBKQ96KB5 322 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 HSFY1Q96LI6 401 aa15.99■□□□□ 0.15
VRK3-207ENST00000594092 METTL5Q9NRN9 209 aaKnown RBP15.99■□□□□ 0.15
VRK3-207ENST00000594092 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 DDX3YO15523 660 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 PAPSS1O43252 624 aaPredicted RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 SPOPO43791 374 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 AP1G2O75843 785 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 RFC1P35251 1148 aaPredicted RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 EPHB4P54760 987 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 SNX16P57768 344 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 OGDHQ02218 1023 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 ZNF252P-AS1Q0IIN9 211 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 MRPL58Q14197 206 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 FAM102AQ5T9C2 384 aaPredicted RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 OLFML1Q6UWY5 402 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 PIGZQ86VD9 579 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 CEP57Q86XR8 500 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 CMTR2Q8IYT2 770 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 JOSD2Q8TAC2 188 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 SMARCD1Q96GM5 515 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 PIWIL1Q96J94 861 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 B3GALT6Q96L58 329 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 SMOQ99835 787 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 PTPRSQ13332 1948 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 MIF4GDA9UHW6 222 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 EFEMP2O95967 443 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 SLC1A1P43005 524 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 ACADSBP45954 432 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 CACNA2D1P54289 1103 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 MAP3K7CLP57077 242 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 BTG3Q14201 252 aaPredicted RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 MAPRE1Q15691 268 aaKnown RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 TMEM240Q5SV17 173 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 TAS1R1Q7RTX1 841 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 ZNF572Q7Z3I7 529 aaPredicted RBP15.98■□□□□ 0.15
VRK3-207ENST00000594092 SCUBE3Q8IX30 993 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 RHOBTB2Q9BYZ6 727 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 ZCWPW1Q9H0M4 648 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
VRK3-207ENST00000594092 PDE2AO00408 941 aaPredicted RBP15.97■□□□□ 0.15
VRK3-207ENST00000594092 OR4Q2P0C623 313 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 LCP1P13796 627 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 SYN1P17600 705 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 MAN1A1P33908 653 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 SLC6A3Q01959 620 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 CTXN3Q4LDR2 81 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 RTP2Q5QGT7 225 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 SPOUT1Q5T280 376 aaKnown RBP15.97■□□□□ 0.15
VRK3-207ENST00000594092 KCNT2Q6UVM3 1135 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 ZDHHC17Q8IUH5 632 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 GPR161Q8N6U8 529 aaKnown RBP15.97■□□□□ 0.15
VRK3-207ENST00000594092 ZMIZ2Q8NF64 920 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 KCTD13Q8WZ19 329 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 ANKRD7Q92527 254 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 KRT35Q92764 455 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 CSNK1G1Q9HCP0 422 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 LCMT1Q9UIC8 334 aa15.97■□□□□ 0.15
VRK3-207ENST00000594092 MRPL42Q9Y6G3 142 aaKnown RBP15.97■□□□□ 0.15
VRK3-207ENST00000594092 BDNFP23560 247 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 CTNNA2P26232 953 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 CTNNA1P35221 906 aaKnown RBP15.96■□□□□ 0.15
VRK3-207ENST00000594092 MARCKSL1P49006 195 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 RABGGTBP53611 331 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 ITIH3Q06033 890 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 SLC39A12Q504Y0 691 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 DAB2IPQ5VWQ8 1189 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 ZNF280DQ6N043 979 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 PSRC1Q6PGN9 363 aaPredicted RBP15.96■□□□□ 0.15
VRK3-207ENST00000594092 DCP1BQ8IZD4 617 aaKnown RBP15.96■□□□□ 0.15
VRK3-207ENST00000594092 EMC1Q8N766 993 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
VRK3-207ENST00000594092 FNIP1Q8TF40 1166 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 CLEC4CQ8WTT0 213 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 ALG3Q92685 438 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 KHSRPQ92945 711 aaKnown RBP eCLIP15.96■□□□□ 0.15
VRK3-207ENST00000594092 MS4A14Q96JA4 679 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 ZNF558Q96NG5 402 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 KCNK16Q96T55 309 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 YME1L1Q96TA2 773 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.96■□□□□ 0.151e-6■■■□□ 15.1
VRK3-207ENST00000594092 TTPALQ9BTX7 342 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 CXXC1Q9P0U4 656 aaPredicted RBP15.96■□□□□ 0.15
VRK3-207ENST00000594092 TMEM59LQ9UK28 342 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 NLRC5Q86WI3 1866 aa15.96■□□□□ 0.15
VRK3-207ENST00000594092 OR6C75A6NL08 312 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 PEX5P50542 639 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 TAF5Q15542 800 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 DCAF12L1Q5VU92 463 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 C4orf50Q6ZRC1 276 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 SPATA2LQ8IUW3 424 aaPredicted RBP15.96■□□□□ 0.14
VRK3-207ENST00000594092 RNF168Q8IYW5 571 aaPredicted RBP15.96■□□□□ 0.14
VRK3-207ENST00000594092 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 NIPA2Q8N8Q9 360 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 HTATIP2Q9BUP3 242 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 VN1R3Q9BXE9 311 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms