RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CTNNA2P26232 953 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 ALDH7A1P49419 539 aaKnown RBP21.89■■□□□ 1.1
PNKP-203ENST00000593946 FPGSQ05932 587 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 NIPA2Q8N8Q9 360 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.89■■□□□ 1.1
PNKP-203ENST00000593946 KCTD13Q8WZ19 329 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 ALG3Q92685 438 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 KRT35Q92764 455 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 PIWIL1Q96J94 861 aaKnown RBP21.89■■□□□ 1.1
PNKP-203ENST00000593946 PBKQ96KB5 322 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 TMEM30AQ9NV96 361 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 CCDC66A2RUB6 948 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 PDE2AO00408 941 aaPredicted RBP21.89■■□□□ 1.09
PNKP-203ENST00000593946 CDR1P51861 262 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 CKAP4Q07065 602 aaKnown RBP21.89■■□□□ 1.09
PNKP-203ENST00000593946 FAM117BQ6P1L5 589 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 SCUBE3Q8IX30 993 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 CMTR2Q8IYT2 770 aaKnown RBP21.89■■□□□ 1.09
PNKP-203ENST00000593946 UBL4BQ8N7F7 174 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 SMOQ99835 787 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 ZCWPW1Q9H0M4 648 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 CSNK1G1Q9HCP0 422 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 RNF14Q9UBS8 474 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 TMEM59LQ9UK28 342 aa21.89■■□□□ 1.09
PNKP-203ENST00000593946 CTIFO43310 598 aaKnown RBP21.88■■□□□ 1.09
PNKP-203ENST00000593946 SCNN1AP37088 669 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 MARCKSL1P49006 195 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 PEX5P50542 639 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 CACNA2D1P54289 1103 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 MAP3K7CLP57077 242 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 SLC6A3Q01959 620 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 PIGHQ14442 188 aaPredicted RBP21.88■■□□□ 1.09
PNKP-203ENST00000593946 DCAF12L1Q5VU92 463 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 ZNF365Q70YC5 407 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 ZNF572Q7Z3I7 529 aaPredicted RBP21.88■■□□□ 1.09
PNKP-203ENST00000593946 C7orf61Q8IZ16 206 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 ZMIZ2Q8NF64 920 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 CARD9Q9H257 536 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 PCDHA3Q9Y5H8 950 aa21.88■■□□□ 1.09
PNKP-203ENST00000593946 TADA3O75528 432 aa21.87■■□□□ 1.09
PNKP-203ENST00000593946 FGBP02675 491 aa21.87■■□□□ 1.09
PNKP-203ENST00000593946 CEP57Q86XR8 500 aa21.87■■□□□ 1.09
PNKP-203ENST00000593946 RHOBTB2Q9BYZ6 727 aa21.87■■□□□ 1.09
PNKP-203ENST00000593946 LCP1P13796 627 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 BTG3Q14201 252 aaPredicted RBP21.86■■□□□ 1.09
PNKP-203ENST00000593946 DAB2IPQ5VWQ8 1189 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 ZNF280DQ6N043 979 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 KCNT2Q6UVM3 1135 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 RNF168Q8IYW5 571 aaPredicted RBP21.86■■□□□ 1.09
PNKP-203ENST00000593946 EMC1Q8N766 993 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 KHSRPQ92945 711 aaKnown RBP eCLIP21.86■■□□□ 1.09
PNKP-203ENST00000593946 IGSF21Q96ID5 467 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 MS4A14Q96JA4 679 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 B3GALT6Q96L58 329 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 KCNK16Q96T55 309 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 UBXN6Q9BZV1 441 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 LAMA2P24043 3122 aaKnown RBP21.86■■□□□ 1.09
PNKP-203ENST00000593946 UQCRHLA0A096LP55 91 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CTAGE15A4D2H0 777 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 F8VP50 259 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 UQCRHP07919 91 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 OR4Q2P0C623 313 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CTAGE8P0CG41 777 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 BDNFP23560 247 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 ADIGQ0VDE8 80 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CFAP221Q4G0U5 840 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CTXN3Q4LDR2 81 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 RTP2Q5QGT7 225 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CCDC181Q5TID7 509 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 C4orf50Q6ZRC1 276 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 SLC26A9Q7LBE3 791 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CTAGE6Q86UF2 777 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CTAGE4Q8IX94 777 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 DCP1BQ8IZD4 617 aaKnown RBP21.86■■□□□ 1.09
PNKP-203ENST00000593946 RASGEF1CQ8N431 466 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 CLEC4CQ8WTT0 213 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 EHD2Q9NZN4 543 aa21.86■■□□□ 1.09
PNKP-203ENST00000593946 OR6C75A6NL08 312 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 C2CD4BA6NLJ0 364 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 EFCAB8A8MWE9 144 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 HHLA1C9JL84 531 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 TBC1D4O60343 1298 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 PSMA2P25787 234 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 EPHB4P54760 987 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 SLC39A12Q504Y0 691 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 RAB41Q5JT25 222 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 TRNP1Q6NT89 227 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 ARCQ7LC44 396 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 TAS1R1Q7RTX1 841 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 ACTRT1Q8TDG2 376 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 RPGRIP1Q96KN7 1286 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 TTPALQ9BTX7 342 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 VN1R3Q9BXE9 311 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 DMAP1Q9NPF5 467 aaPredicted RBP21.85■■□□□ 1.09
PNKP-203ENST00000593946 SMARCAL1Q9NZC9 954 aa21.85■■□□□ 1.09
PNKP-203ENST00000593946 MRPL42Q9Y6G3 142 aaKnown RBP21.85■■□□□ 1.09
PNKP-203ENST00000593946 ZBBXA8MT70 800 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 PSTPIP1O43586 416 aa21.84■■□□□ 1.09
PNKP-203ENST00000593946 CEP104O60308 925 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms