RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RHOP08100 348 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 NBPF7P0C2Y1 421 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-216ENST00000593223 TRIM27P14373 513 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 RPL17P18621 184 aaKnown RBP5.92□□□□□ -1.46
SMAD4-216ENST00000593223 PPIFP30405 207 aaKnown RBP5.92□□□□□ -1.46
SMAD4-216ENST00000593223 ADRA1BP35368 520 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 PRKAG1P54619 331 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 TBX4P57082 545 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 PURAQ00577 322 aaKnown RBP5.92□□□□□ -1.46
SMAD4-216ENST00000593223 PTPRRQ15256 657 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 NBPF8Q3BBV2 869 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 SESTD1Q86VW0 696 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 OR56A3Q8NH54 315 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 NAP1L5Q96NT1 182 aaPredicted RBP5.92□□□□□ -1.46
SMAD4-216ENST00000593223 MESP1Q9BRJ9 268 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 ITGB1BP2Q9UKP3 347 aa5.92□□□□□ -1.46
SMAD4-216ENST00000593223 NCOA1Q15788 1441 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 UHRF1BP1LA0JNW5 1464 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 KDM5BQ9UGL1 1544 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 A0A0U1RQG5 324 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-216ENST00000593223 MBD3L4A6NDZ8 208 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-216ENST00000593223 MBD3L3A6NE82 208 aaPredicted RBP5.91□□□□□ -1.46
SMAD4-216ENST00000593223 APAF1O14727 1248 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 EIF3JO75822 258 aaKnown RBP5.91□□□□□ -1.46
SMAD4-216ENST00000593223 MYL1P05976 194 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 PDHA1P08559 390 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 KLRC1P26715 233 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 MYO1EQ12965 1108 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 TBCCQ15814 346 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 MICU3Q86XE3 530 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 GAS2L3Q86XJ1 694 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 SLC15A3Q8IY34 581 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 FAM109AQ8N4B1 249 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 PJA1Q8NG27 643 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 GPR150Q8NGU9 434 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 BTBD1Q9H0C5 482 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 PNPLA8Q9NP80 782 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 SLC52A1Q9NWF4 448 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 COL20A1Q9P218 1284 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 NDRG4Q9ULP0 352 aaKnown RBP5.91□□□□□ -1.46
SMAD4-216ENST00000593223 TBC1D30Q9Y2I9 924 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 TTC37Q6PGP7 1564 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 SALL3Q9BXA9 1300 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 ALKQ9UM73 1620 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 SIGLEC1Q9BZZ2 1709 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 UACAQ9BZF9 1416 aa5.91□□□□□ -1.46
SMAD4-216ENST00000593223 CCDC151A5D8V7 595 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 PMM2O15305 246 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 ZNF169Q14929 603 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-216ENST00000593223 RALBP1Q15311 655 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 TXNRD1Q16881 649 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 INSCQ1MX18 579 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 TEDDM1Q5T9Z0 273 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 SMC5Q8IY18 1101 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 KRT78Q8N1N4 520 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 CAGE1Q8TC20 777 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 BPIFB1Q8TDL5 484 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 IPCEF1Q8WWN9 437 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-216ENST00000593223 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 PHKBQ93100 1093 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 PPP2R3CQ969Q6 453 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 STRBPQ96SI9 672 aaKnown RBP5.9□□□□□ -1.46
SMAD4-216ENST00000593223 CXorf36Q9H7Y0 433 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 EHD3Q9NZN3 535 aa5.9□□□□□ -1.46
SMAD4-216ENST00000593223 ADGRA2Q96PE1 1338 aa5.9□□□□□ -1.47
SMAD4-216ENST00000593223 TNIKQ9UKE5 1360 aa5.9□□□□□ -1.47
SMAD4-216ENST00000593223 WDR7Q9Y4E6 1490 aa5.9□□□□□ -1.47
SMAD4-216ENST00000593223 LOC102723971A0A1B0GUV8 181 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 ADM5C9JUS6 153 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 FOXN3O00409 490 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 RGS10O43665 173 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 TLR5O60602 858 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 RASAL1O95294 804 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 MYL3P08590 195 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 NR2F6P10588 404 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 PHKG2P15735 406 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 PROZP22891 400 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 DGKEP52429 567 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 MAPK10P53779 464 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 IFIT5Q13325 482 aaKnown RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 ZIK1Q3SY52 487 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 DEPDC1Q5TB30 811 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 CACHD1Q5VU97 1274 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 OLFML1Q6UWY5 402 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 ZDHHC24Q6UX98 284 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 PEG10Q86TG7 708 aaKnown RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 YAF2Q8IY57 180 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 SPARTQ8N0X7 666 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 SMCR8Q8TEV9 937 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 PBKQ96KB5 322 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 TBCBQ99426 244 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 AGAP2Q99490 1192 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 UNKQ9C0B0 810 aaKnown RBP5.89□□□□□ -1.47
SMAD4-216ENST00000593223 GLOD4Q9HC38 313 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 SERHLQ9NQF3 203 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 SSX2IPQ9Y2D8 614 aa5.89□□□□□ -1.47
SMAD4-216ENST00000593223 POGZQ7Z3K3 1410 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms