RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 A0A0B4J269 797 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 MAP3K13O43283 966 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 SLC26A4O43511 780 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 NOL4O94818 638 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CFIP05156 583 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 USP17L7P0C7H9 530 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CSH1P0DML2 217 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CSH2P0DML3 217 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 TIE1P35590 1138 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 UBA7P41226 1012 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 P2RY2P41231 377 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 TAF6P49848 677 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 SEMA3BQ13214 749 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CRY1Q16526 586 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 SHC4Q6S5L8 630 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 USP49Q70CQ1 688 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 C12orf40Q86WS4 652 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 DCP1BQ8IZD4 617 aaKnown RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 PNPLA1Q8N8W4 532 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 ZSWIM2Q8NEG5 633 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 C2orf15Q8WU43 125 aaKnown RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 ATP2A3Q93084 1043 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 REEP2Q9BRK0 252 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 NUSAP1Q9BXS6 441 aaKnown RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 SLC32A1Q9H598 525 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 EVLQ9UI08 416 aaPredicted RBP10.55□□□□□ -0.72
RETREG3-211ENST00000591547 GTF3C4Q9UKN8 822 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 PCDHA7Q9UN72 937 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 PCDH15Q96QU1 1955 aa10.55□□□□□ -0.72
RETREG3-211ENST00000591547 IGSF10Q6WRI0 2623 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 TRAV19A0A0A6YYK7 116 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 KPNA7A9QM74 516 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 K7ENM7 598 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PLCG1P19174 1290 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 KDSRQ06136 332 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 SCAPQ12770 1279 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 LMAN2Q12907 356 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 CRELD2Q6UXH1 353 aaPredicted RBP10.54□□□□□ -0.72
RETREG3-211ENST00000591547 LPCAT2Q7L5N7 544 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PDZD3Q86UT5 571 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PROSER1Q86XN7 944 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 SCN4BQ8IWT1 228 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 MYCT1Q8N699 235 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 IL17RCQ8NAC3 791 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 HMGB4Q8WW32 186 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 CALML4Q96GE6 196 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PKMYT1Q99640 499 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 TIPINQ9BVW5 301 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 ZHX3Q9H4I2 956 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 ZMYM5Q9UJ78 669 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PILRBQ9UKJ0 227 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 DSEQ9UL01 958 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 PLXND1Q9Y4D7 1925 aa10.54□□□□□ -0.72
RETREG3-211ENST00000591547 GON4LQ3T8J9 2241 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 A0A087X0B3 334 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 LEFTY2O00292 366 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 ADAM23O75077 832 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 ATP2C2O75185 946 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 PIGRP01833 764 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 CYP17A1P05093 508 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 CD59P13987 128 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 HDCP19113 662 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 USP46P62068 366 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 TSPY1Q01534 308 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 RESP18Q5W5W9 173 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 LYSMD4Q5XG99 296 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 ADALQ6DHV7 355 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 SLC23A3Q6PIS1 610 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 FILIP1Q7Z7B0 1213 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 C11orf74Q86VG3 221 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 MARCH9Q86YJ5 346 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 HNRNPLLQ8WVV9 542 aaKnown RBP10.53□□□□□ -0.72
RETREG3-211ENST00000591547 FIZ1Q96SL8 496 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 DDX43Q9NXZ2 648 aaKnown RBP10.53□□□□□ -0.72
RETREG3-211ENST00000591547 BCCIPQ9P287 314 aaKnown RBP eCLIP10.53□□□□□ -0.72
RETREG3-211ENST00000591547 STK17AQ9UEE5 414 aa10.53□□□□□ -0.72
RETREG3-211ENST00000591547 TCRBV21S2A2A0A5A6 115 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 SH3BP5O60239 455 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 NFATC1O95644 943 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 PFKFB1P16118 471 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 POLR2BP30876 1174 aaKnown RBP10.52□□□□□ -0.73
RETREG3-211ENST00000591547 STAT6P42226 847 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 WASP42768 502 aa10.52□□□□□ -0.73
RETREG3-211ENST00000591547 RPL10AP62906 217 aaKnown RBP10.52□□□□□ -0.73
RETREG3-211ENST00000591547 NR1H3Q13133 447 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms