RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PTPN11Q06124 597 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 RXFP2Q8WXD0 754 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 TMEM176AQ96HP8 235 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 ERAP1Q9NZ08 941 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 SLIT2O94813 1529 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 C4orf22Q6V702 233 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 RNF135Q8IUD6 432 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 C12orf56Q8IXR9 622 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 AKT1S1Q96B36 256 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 SIK2Q9H0K1 926 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 XAB2Q9HCS7 855 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 DFFAO00273 331 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 EEF2KO00418 725 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 PFDN1O60925 122 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 POLBP06746 335 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 PDK2Q15119 407 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 OLFM3Q96PB7 478 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 FAM193BQ96PV7 902 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 CNPY3Q9BT09 278 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 ROBO1Q9Y6N7 1651 aa17.81■□□□□ 0.44
SMARCA4-215ENST00000590574 BANF1O75531 89 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 STAG3L1P0CL83 205 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 AMHR2Q16671 573 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PDZD8Q8NEN9 1154 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PIN4Q9Y237 131 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 STARD13Q9Y3M8 1113 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 KBTBD13C9JR72 458 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PFDN6O15212 129 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 MAGEB2O15479 319 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 SH3BP5LQ7L8J4 393 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ASAP3Q8TDY4 903 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 FNDC3AQ9Y2H6 1198 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ASTN2O75129 1339 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 RPS12P25398 132 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 SERPINB4P48594 390 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ACOT1Q86TX2 421 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ALLCQ8N6M5 410 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PLEKHA5Q9HAU0 1116 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 DSG3P32926 999 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PTGIRP43119 386 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 MED21Q13503 144 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 DGKZQ13574 1117 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 DCAF6Q58WW2 860 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 RNF43Q68DV7 783 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 BRSK2Q8IWQ3 736 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 PIK3R5Q8WYR1 880 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 TLCD1Q96CP7 247 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 CMTM5Q96DZ9 223 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 CPB2Q96IY4 423 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 MBOAT7Q96N66 472 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ACTL7BQ9Y614 415 aa17.8■□□□□ 0.44
SMARCA4-215ENST00000590574 ESRRGP62508 458 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 ARHGAP18Q8N392 663 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 FHDC1Q9C0D6 1143 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SLC12A1Q13621 1099 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SWT1Q5T5J6 900 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.444e-7■■□□□ 11.7
SMARCA4-215ENST00000590574 KDELC2Q7Z4H8 507 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 MFSD14AQ96MC6 490 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 CSDE1O75534 798 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 DEUP1Q05D60 604 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 TASP1Q9H6P5 420 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 FOXO6A8MYZ6 492 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 AIM2O14862 343 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 UNC5CO95185 931 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 PMLP29590 882 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SPRP35270 261 aaPredicted RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 CDH8P55286 799 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 RPL7AP62424 266 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 NOMO3P69849 1222 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 PDK1Q15118 436 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 TBCCQ15814 346 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 WASHC2DQ5SRD0 308 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 SCUBE1Q8IWY4 988 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 APOPT1Q96IL0 206 aa17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 R3HDM2Q9Y2K5 976 aaKnown RBP17.79■□□□□ 0.44
SMARCA4-215ENST00000590574 DNM1LO00429 736 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 NPTXRO95502 500 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 HSPA8P11142 646 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 IRX1P78414 480 aaPredicted RBP17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 SLC30A9Q6PML9 568 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 SCG3Q8WXD2 468 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 OSBPL7Q9BZF2 842 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 ACADSP16219 412 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 COPAP53621 1224 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 TRIP10Q15642 601 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 USP33Q8TEY7 942 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 BTBD10Q9BSF8 475 aa17.78■□□□□ 0.44
SMARCA4-215ENST00000590574 C20orf96Q9NUD7 363 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms