RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 NFASCO94856 1347 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 FAM47DPA6NHR8 397 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CFLARO15519 480 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 AMPD1P23109 780 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CENPCQ03188 943 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 BMPR2Q13873 1038 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 KLHL38Q2WGJ6 581 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 KDM7AQ6ZMT4 941 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 NXF3Q9H4D5 531 aaKnown RBP15.21■□□□□ 0.03
RETREG3-208ENST00000589797 CACNG4Q9UBN1 327 aa15.21■□□□□ 0.03
RETREG3-208ENST00000589797 MAPK13O15264 365 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 USP12O75317 370 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 C4BPAP04003 597 aaKnown RBP15.21■□□□□ 0.02
RETREG3-208ENST00000589797 GARSP41250 739 aaKnown RBP15.21■□□□□ 0.02
RETREG3-208ENST00000589797 BOLA3Q53S33 107 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 AGBL2Q5U5Z8 902 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.02
RETREG3-208ENST00000589797 GPR142Q7Z601 462 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 ADGRF2Q8IZF7 708 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 CNPY3Q9BT09 278 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 TJP2Q9UDY2 1190 aa15.21■□□□□ 0.02
RETREG3-208ENST00000589797 H3BRJ5 948 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 GIPC1O14908 333 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 FAM200BP0CF97 657 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 EIF4BP23588 611 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 RABGGTBP53611 331 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 ADIGQ0VDE8 80 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 TTC27Q6P3X3 843 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 SLC39A4Q6P5W5 647 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 EP400NLQ6ZTU2 488 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 SPATA21Q7Z572 469 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 MICAL1Q8TDZ2 1067 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 SKA2Q8WVK7 121 aaPredicted RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 RSRC1Q96IZ7 334 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 PGLYRP2Q96PD5 576 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 PLEKHA5Q9HAU0 1116 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 SDK1Q7Z5N4 2213 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 KAT6AQ92794 2004 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 EEF2KO00418 725 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 DDX3YO15523 660 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 STRNO43815 780 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 TADA2AO75478 443 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 CCT6BQ92526 530 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 CELF6Q96J87 481 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 LPIN3Q9BQK8 851 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 UNKQ9C0B0 810 aaKnown RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 MYH7P12883 1935 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 AHDC1Q5TGY3 1603 aaPredicted RBP15.2■□□□□ 0.02
RETREG3-208ENST00000589797 RGS20O76081 388 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 CYP1A2P05177 515 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 FAM111AQ96PZ2 611 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 SHCBP1LQ9BZQ2 653 aa15.2■□□□□ 0.02
RETREG3-208ENST00000589797 MYH11P35749 1972 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 TRIM49D1C9J1S8 452 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CLDN5O00501 218 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CPT1AP50416 773 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 ATN1P54259 1190 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 PTPN20Q4JDL3 420 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CDKL3Q8IVW4 592 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 IQCKQ8N0W5 287 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 FAM136AQ96C01 138 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CPXM1Q96SM3 734 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CCDC68Q9H2F9 335 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 TMEM134Q9H6X4 195 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 UBN1Q9NPG3 1134 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 AGPSO00116 658 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 NRLP54845 237 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CRADDP78560 199 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SLC12A1Q13621 1099 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 TAF5Q15542 800 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 ZC3H12AQ5D1E8 599 aaKnown RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SPATA2LQ8IUW3 424 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 PPIL6Q8IXY8 311 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 ERP27Q96DN0 273 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 ZFP42Q96MM3 310 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CRYBG1Q9Y4K1 1723 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 DIAPH2O60879 1101 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 CPA2P48052 419 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SLC27A1Q6PCB7 646 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SLC12A6Q9UHW9 1150 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 AP4E1Q9UPM8 1137 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 MAFBQ9Y5Q3 323 aaPredicted RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 MCF2P10911 925 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 MFSD10Q14728 455 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 RPS6KA2Q15349 733 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SV2CQ496J9 727 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 FOXR2Q6PJQ5 311 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 SEPT5Q99719 369 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms