RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PLD1Q13393 1074 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 KCNC3Q14003 757 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 DDR2Q16832 855 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 RTL10Q7L3V2 364 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 PIGZQ86VD9 579 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 TMTC1Q8IUR5 882 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 WDTC1Q8N5D0 677 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 DEFB123Q8N688 67 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 C1orf131Q8NDD1 294 aaKnown RBP16.04■□□□□ 0.16
ATG4D-211ENST00000589753 SLC35F5Q8WV83 523 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 CCDC42Q96M95 316 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 NOX5Q96PH1 765 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 PPP1R9BQ96SB3 815 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 CDX2Q99626 313 aaPredicted RBP16.04■□□□□ 0.16
ATG4D-211ENST00000589753 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 PNPLA8Q9NP80 782 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
ATG4D-211ENST00000589753 TULP2O00295 520 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 DDX3XO00571 662 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATG4D-211ENST00000589753 AKR1B10O60218 316 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 ZMYND10O75800 440 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 LRG1P02750 347 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
ATG4D-211ENST00000589753 ATF6P18850 670 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 NOMO3P69849 1222 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 RBM10P98175 930 aaKnown RBP16.03■□□□□ 0.16
ATG4D-211ENST00000589753 TWF1Q12792 350 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 SDHAF4Q5VUM1 108 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 PMF1Q6P1K2 205 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 TMEM139Q8IV31 216 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 LRRC8AQ8IWT6 810 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 MICALL1Q8N3F8 863 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 EFHBQ8N7U6 833 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 VN1R2Q8NFZ6 395 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 SLC30A5Q8TAD4 765 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 STK32AQ8WU08 396 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 CPA5Q8WXQ8 436 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 CASP10Q92851 521 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 CEP295NLQ96MC4 621 aa16.03■□□□□ 0.16
ATG4D-211ENST00000589753 A0A087X0T9 212 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 HHLA1C9JL84 531 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 FAM228BP0C875 321 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.16
ATG4D-211ENST00000589753 RGS7P49802 495 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 KIF11P52732 1056 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 EPHB3P54753 998 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 CENPCQ03188 943 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.16
ATG4D-211ENST00000589753 PDCLQ13371 301 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 VEPH1Q14D04 833 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 ASTE1Q2TB18 679 aaPredicted RBP16.02■□□□□ 0.16
ATG4D-211ENST00000589753 TMEM184AQ6ZMB5 413 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 GPR152Q8TDT2 470 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 GIPC2Q8TF65 315 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 KCTD13Q8WZ19 329 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 HSFY1Q96LI6 401 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.16
ATG4D-211ENST00000589753 SOWAHDA6NJG2 315 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 LINC01565O15544 149 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 NCK2O43639 380 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 NRDCO43847 1150 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 HNRNPA1P09651 372 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATG4D-211ENST00000589753 GZMAP12544 262 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 HOXA9P31269 272 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 CYLC1P35663 651 aaPredicted RBP16.01■□□□□ 0.15
ATG4D-211ENST00000589753 SLC5A3P53794 718 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ADAM15Q13444 863 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 SLC18A3Q16572 532 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 RAB41Q5JT25 222 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ACAD10Q6JQN1 1059 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 DENND5BQ6ZUT9 1274 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ERICH1Q86X53 443 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 NUP93Q8N1F7 819 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ELMOD1Q8N336 334 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 MSANTD4Q8NCY6 345 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 IPO4Q8TEX9 1081 aaKnown RBP16.01■□□□□ 0.15
ATG4D-211ENST00000589753 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 SLC4A5Q9BY07 1137 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 CYLDQ9NQC7 956 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ZDHHC7Q9NXF8 308 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 ASB3Q9Y575 518 aa16.01■□□□□ 0.15
ATG4D-211ENST00000589753 MTCL1Q9Y4B5 1905 aaKnown RBP16.01■□□□□ 0.15
ATG4D-211ENST00000589753 FAM170AA1A519 330 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 SLC38A8A6NNN8 435 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 TMCO5BA8MYB1 307 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 TNFRSF10BO14763 440 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms