RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CACNA2D1P54289 1103 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 MAP3K7CLP57077 242 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 SNX16P57768 344 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 FMO1Q01740 532 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 PDE4CQ08493 712 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 VEPH1Q14D04 833 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 PPP1R2P3Q6NXS1 205 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 DENND1BQ6P3S1 775 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 ELMOD1Q8N336 334 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 WDTC1Q8N5D0 677 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 SLC20A1Q8WUM9 679 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 HSFY1Q96LI6 401 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-218ENST00000589294 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 SYT11Q9BT88 431 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 CYLDQ9NQC7 956 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 TMEM30AQ9NV96 361 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 YIPF1Q9Y548 306 aa12.86□□□□□ -0.35
DNMT1-218ENST00000589294 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 SSU72P8A0A1W2PR75 194 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 M0QYV0 167 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 LINC01565O15544 149 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 XYLBO75191 536 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 RTN3O95197 1032 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-218ENST00000589294 GLP2RO95838 553 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 CYP1A1P04798 512 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-218ENST00000589294 CFHP08603 1231 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 CSH1P0DML2 217 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 CSH2P0DML3 217 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 GZMAP12544 262 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 ACADSBP45954 432 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 TWF1Q12792 350 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-218ENST00000589294 ANKRD54Q6NXT1 300 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 DNAJB7Q7Z6W7 309 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-218ENST00000589294 TMEM110Q86TL2 294 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 SLC30A5Q8TAD4 765 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
DNMT1-218ENST00000589294 PSMG2Q969U7 264 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 SFXN1Q9H9B4 322 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 IL37Q9NZH6 218 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 ARHGAP20Q9P2F6 1191 aa12.85□□□□□ -0.35
DNMT1-218ENST00000589294 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 SLC38A8A6NNN8 435 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 RFPL2O75678 378 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 SOAT2O75908 522 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 PTPN2P17706 415 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 ATF6P18850 670 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 FECHP22830 423 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 ITIH3Q06033 890 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 TAF12Q16514 161 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 CLEC16AQ2KHT3 1053 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 RAB41Q5JT25 222 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 PMF1Q6P1K2 205 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
DNMT1-218ENST00000589294 PDLIM2Q96JY6 352 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 MYRFLQ96LU7 910 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 CCDC42Q96M95 316 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 MIS12Q9H081 205 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 FBXO44Q9H4M3 255 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 CLEC1BQ9P126 229 aa12.84□□□□□ -0.35
DNMT1-218ENST00000589294 FAM92AA1XBS5 289 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 FGF19O95750 216 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 UNGP13051 313 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 HMGA1P17096 107 aaKnown RBP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 YWHAQP27348 245 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 LTBRP36941 435 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 PPP3CCP48454 512 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 GPR15P49685 360 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 KIF11P52732 1056 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 NOMO3P69849 1222 aa12.83□□□□□ -0.36
DNMT1-218ENST00000589294 CCDC85BQ15834 202 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 ASTE1Q2TB18 679 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-218ENST00000589294 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms