RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 TLE2Q04725 743 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 MYO1EQ12965 1108 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 ATP1A4Q13733 1029 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 TSHZ3Q63HK5 1081 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SPATA31D4Q6ZUB0 917 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 LGI4Q8N135 537 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 OR6Y1Q8NGX8 325 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 ZNF483Q8TF39 744 aaPredicted RBP6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SDCCAG3Q96C92 435 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 MED15Q96RN5 788 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 TRIM5Q9C035 493 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 SMC4Q9NTJ3 1288 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 MRPS17Q9Y2R5 130 aaKnown RBP6.28□□□□□ -1.4
TUBD1-208ENST00000588009 KAT6BQ8WYB5 2073 aa6.28□□□□□ -1.4
TUBD1-208ENST00000588009 A6NLC8 198 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 VIPP01282 170 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 PRKCBP05771 671 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 JUPP14923 745 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 KLRK1P26718 216 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 AARSP49588 968 aaKnown RBP eCLIP6.27□□□□□ -1.41
TUBD1-208ENST00000588009 EPHB4P54760 987 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 EIF5P55010 431 aaKnown RBP6.27□□□□□ -1.41
TUBD1-208ENST00000588009 GPS1Q13098 491 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 FAM102AQ5T9C2 384 aaPredicted RBP6.27□□□□□ -1.41
TUBD1-208ENST00000588009 FAAH2Q6GMR7 532 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 ABLIM2Q6H8Q1 611 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 FAM180BQ6P0A1 224 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 TMEM108Q6UXF1 575 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 RHOT2Q8IXI1 618 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 NRSN1Q8IZ57 195 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 MB21D1Q8N884 522 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 CPT1CQ8TCG5 803 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 CSGALNACT1Q8TDX6 532 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 GRAMD1AQ96CP6 724 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 TRAPPC9Q96Q05 1148 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 OR14A2Q96R54 314 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 NEU1Q99519 415 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 PTDSS2Q9BVG9 487 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 TWSG1Q9GZX9 223 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 RASSF1Q9NS23 344 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 CTTNBP2NLQ9P2B4 639 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
TUBD1-208ENST00000588009 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.27□□□□□ -1.41
TUBD1-208ENST00000588009 ITIH6Q6UXX5 1313 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 CCDC78A2IDD5 438 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 E7ENX8 843 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 H0Y3Z8 333 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 CD3EAPO15446 510 aaKnown RBP6.26□□□□□ -1.41
TUBD1-208ENST00000588009 SRGAP2O75044 1071 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 SUN1O94901 812 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 KCNC1P48547 511 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 PRKAG1P54619 331 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 ACTR2P61160 394 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 TAP2Q03519 686 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 TRPC3Q13507 836 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 KCNA10Q16322 511 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 DCAF17Q5H9S7 520 aaPredicted RBP6.26□□□□□ -1.41
TUBD1-208ENST00000588009 AGAP9Q5VTM2 703 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.26□□□□□ -1.41
TUBD1-208ENST00000588009 RRAGAQ7L523 313 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 HEATR4Q86WZ0 1026 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 SPARTQ8N0X7 666 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 PCYOX1LQ8NBM8 494 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 DNAJB14Q8TBM8 379 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 COG8Q96MW5 612 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 KCNC2Q96PR1 638 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 MEGF9Q9H1U4 602 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 CXorf36Q9H7Y0 433 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 GBA2Q9HCG7 927 aaPredicted RBP6.26□□□□□ -1.41
TUBD1-208ENST00000588009 DNAJB11Q9UBS4 358 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 FBXO2Q9UK22 296 aaPredicted RBP6.26□□□□□ -1.41
TUBD1-208ENST00000588009 DAPP1Q9UN19 280 aa6.26□□□□□ -1.41
TUBD1-208ENST00000588009 J3KTA2 159 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 LEFTY2O00292 366 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 TK1P04183 234 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 IFIT1P09914 478 aaKnown RBP6.25□□□□□ -1.41
TUBD1-208ENST00000588009 ITGALP20701 1170 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 KRT9P35527 623 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 MSX2P35548 267 aaPredicted RBP6.25□□□□□ -1.41
TUBD1-208ENST00000588009 LIFRP42702 1097 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 SEC24CP53992 1094 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 NHLH2Q02577 135 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 FOXL1Q12952 345 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 GRM4Q14833 912 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 SURF1Q15526 300 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 TRIM60Q495X7 471 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 NT5DC1Q5TFE4 455 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 VPS53Q5VIR6 699 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 SLFN13Q68D06 897 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 RINT1Q6NUQ1 792 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 RAB11FIP2Q7L804 512 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 TMPRSS9Q7Z410 1059 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 TBC1D1Q86TI0 1168 aaPredicted RBP6.25□□□□□ -1.41
TUBD1-208ENST00000588009 D2HGDHQ8N465 521 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 ABHD5Q8WTS1 349 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 HTRA1Q92743 480 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 HDAC2Q92769 488 aaKnown RBP6.25□□□□□ -1.41
TUBD1-208ENST00000588009 ZDHHC12Q96GR4 267 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms