RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 FAM35AQ86V20 835 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 FUKQ8N0W3 1084 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 DTWD2Q8NBA8 298 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 NELFBQ8WX92 580 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 SEMA4DQ92854 862 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 SLC35C1Q96A29 364 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 SMARCD1Q96GM5 515 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 NT5C1AQ9BXI3 368 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 LTB4R2Q9NPC1 389 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 TDP1Q9NUW8 608 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 TMEM30AQ9NV96 361 aa18.24■□□□□ 0.51
RFX1-202ENST00000586913 THG1LQ9NWX6 298 aaKnown RBP18.24■□□□□ 0.51
RFX1-202ENST00000586913 SHISA7A6NL88 538 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 PMM2O15305 246 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 CILPO75339 1184 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 RTN3O95197 1032 aaPredicted RBP18.23■□□□□ 0.51
RFX1-202ENST00000586913 PDE6CP51160 858 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 CACNA2D1P54289 1103 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 DCAF17Q5H9S7 520 aaPredicted RBP18.23■□□□□ 0.51
RFX1-202ENST00000586913 WDR44Q5JSH3 913 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 NUP93Q8N1F7 819 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 USP13Q92995 863 aaPredicted RBP18.23■□□□□ 0.51
RFX1-202ENST00000586913 FOXQ1Q9C009 403 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 DMAP1Q9NPF5 467 aaPredicted RBP18.23■□□□□ 0.51
RFX1-202ENST00000586913 COMMD8Q9NX08 183 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 IL37Q9NZH6 218 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 TRPM5Q9NZQ8 1165 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 GCNT4Q9P109 453 aa18.23■□□□□ 0.51
RFX1-202ENST00000586913 GREB1Q4ZG55 1949 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 TRAV19A0A0A6YYK7 116 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 BIN1O00499 593 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 NCAM2O15394 837 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 LRRN2O75325 713 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 GNA14O95837 355 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 USP17L7P0C7H9 530 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 USP46P62068 366 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 PAK1Q13153 545 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 CBWD6Q4V339 395 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 CBWD3Q5JTY5 395 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 CBWD5Q5RIA9 395 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 KLHL10Q6JEL2 608 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 CSGALNACT1Q8TDX6 532 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 WHAMMQ8TF30 809 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 OVCA2Q8WZ82 227 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 CLDN23Q96B33 292 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 SLITRK1Q96PX8 696 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
RFX1-202ENST00000586913 MED10Q9BTT4 135 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 C8orf33Q9H7E9 229 aaPredicted RBP18.22■□□□□ 0.51
RFX1-202ENST00000586913 CSNK1G1Q9HCP0 422 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 HMGXB4Q9UGU5 601 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 OBSL1O75147 1896 aa18.22■□□□□ 0.51
RFX1-202ENST00000586913 COL4A2P08572 1712 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 FAM170BA6NMN3 283 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 TNFRSF10BO14763 440 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 TCF3P15923 654 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 YWHAQP27348 245 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 MARSP56192 900 aaKnown RBP18.21■□□□□ 0.51
RFX1-202ENST00000586913 GPIHBP1Q8IV16 184 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 SLC2A14Q8TDB8 520 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 TWNKQ96RR1 684 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 KCNK16Q96T55 309 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 FAM83CQ9BQN1 747 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 SMG9Q9H0W8 520 aaKnown RBP18.21■□□□□ 0.51
RFX1-202ENST00000586913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.21■□□□□ 0.516e-9■■■■■ 134.6
RFX1-202ENST00000586913 PIAS3Q9Y6X2 628 aa18.21■□□□□ 0.51
RFX1-202ENST00000586913 FAM92AA1XBS5 289 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 ZNF840PA6NDX5 716 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 P4HA2O15460 535 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 AP1G2O75843 785 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 DCNP07585 359 aaKnown RBP18.2■□□□□ 0.5
RFX1-202ENST00000586913 CCDC130P13994 396 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 RPS9P46781 194 aaKnown RBP18.2■□□□□ 0.5
RFX1-202ENST00000586913 FMO5P49326 533 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 TAF10Q12962 218 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 UBXN2BQ14CS0 331 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 CAMK4Q16566 473 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 CCDC40Q4G0X9 1142 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 ZNF687Q8N1G0 1237 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 KIAA1958Q8N8K9 716 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 PDZD8Q8NEN9 1154 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 CYFIP2Q96F07 1278 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 TRPC7Q9HCX4 862 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 KRT82Q9NSB4 513 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 ARHGAP26Q9UNA1 814 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 CTNND2Q9UQB3 1225 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 CCL26Q9Y258 94 aa18.2■□□□□ 0.5
RFX1-202ENST00000586913 MTF2Q9Y483 593 aaPredicted RBP18.2■□□□□ 0.5
RFX1-202ENST00000586913 FGFR1OPO95684 399 aaKnown RBP18.19■□□□□ 0.5
RFX1-202ENST00000586913 OLFM2O95897 454 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 CKMP06732 381 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 HDCP19113 662 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 CD72P21854 359 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 TARSP26639 723 aaKnown RBP18.19■□□□□ 0.5
RFX1-202ENST00000586913 ORC1Q13415 861 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 SNX30Q5VWJ9 437 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 RALGPS2Q86X27 583 aaPredicted RBP18.19■□□□□ 0.5
RFX1-202ENST00000586913 ZMIZ2Q8NF64 920 aa18.19■□□□□ 0.5
RFX1-202ENST00000586913 FAM3CQ92520 227 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms