RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CWF19L1Q69YN2 538 aaKnown RBP17.09■□□□□ 0.33
ATG4D-205ENST00000586477 TMEM270Q6UE05 265 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 SYN2Q92777 582 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-205ENST00000586477 KREMEN1Q96MU8 473 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 ARID3AQ99856 593 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 MRPL45Q9BRJ2 306 aaKnown RBP17.09■□□□□ 0.33
ATG4D-205ENST00000586477 LRRC3Q9BY71 257 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 TTYH3Q9C0H2 523 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 ZNHIT6Q9NWK9 470 aaKnown RBP17.09■□□□□ 0.33
ATG4D-205ENST00000586477 MAFFQ9ULX9 164 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 YIPF1Q9Y548 306 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 ZFP37Q9Y6Q3 630 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-205ENST00000586477 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 KRBA1A5PL33 1030 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 MED7O43513 233 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 FERP16591 822 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 PTPN2P17706 415 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 ACO1P21399 889 aaKnown RBP17.08■□□□□ 0.32
ATG4D-205ENST00000586477 SOX5P35711 763 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 USP8P40818 1118 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 RAP1GAPP47736 663 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 NDST1P52848 882 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 CDH8P55286 799 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 JAM2P57087 298 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 TWF1Q12792 350 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 DUSP4Q13115 394 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 GJB7Q6PEY0 223 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 LRRTM3Q86VH5 581 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 UBR7Q8N806 425 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 TMEM105Q8N8V8 129 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
ATG4D-205ENST00000586477 C2orf15Q8WU43 125 aaKnown RBP17.08■□□□□ 0.32
ATG4D-205ENST00000586477 NXPE3Q969Y0 559 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 SDCBP2Q9H190 292 aa17.08■□□□□ 0.32
ATG4D-205ENST00000586477 MRPS23Q9Y3D9 190 aaKnown RBP17.08■□□□□ 0.32
ATG4D-205ENST00000586477 DMDP11532 3685 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 EPHB6O15197 1021 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 SOAT2O75908 522 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 GYPCP04921 128 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 CFHP08603 1231 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 SRFP11831 508 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 EPHA5P54756 1037 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 GSDMDP57764 484 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 APBA1Q02410 837 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 TCF15Q12870 199 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
ATG4D-205ENST00000586477 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 TMC8Q8IU68 726 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 MCRS1Q96EZ8 462 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 SYT15Q9BQS2 421 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 PLA2G2FQ9BZM2 168 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 SLC27A5Q9Y2P5 690 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 BZW2Q9Y6E2 419 aaKnown RBP17.07■□□□□ 0.32
ATG4D-205ENST00000586477 VPS13AQ96RL7 3174 aa17.07■□□□□ 0.32
ATG4D-205ENST00000586477 AKR1B15C9JRZ8 316 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-205ENST00000586477 FOXN3O00409 490 aaPredicted RBP17.06■□□□□ 0.32
ATG4D-205ENST00000586477 PI15O43692 258 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 VDRP11473 427 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 FCARP24071 287 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 CASP14P31944 242 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 KRT9P35527 623 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 PDE6CP51160 858 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 SLC8A3P57103 927 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 OSTM1Q86WC4 334 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 ZNF677Q86XU0 584 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 OR8K1Q8NGG5 319 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 GPR152Q8TDT2 470 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 BAP1Q92560 729 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 KAT5Q92993 513 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 KXD1Q9BQD3 176 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 MFSD1Q9H3U5 465 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 SLC2A4RGQ9NR83 387 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 TMLHEQ9NVH6 421 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
ATG4D-205ENST00000586477 MYO15AQ9UKN7 3530 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 COL4A2P08572 1712 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 NCANO14594 1321 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 LRRC53A6NM62 1247 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 HCRTO43612 131 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 MFAP3LO75121 409 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 PDGFRBP09619 1106 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 GJA1P17302 382 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 PTPN1P18031 435 aaKnown RBP17.05■□□□□ 0.32
ATG4D-205ENST00000586477 GNA15P30679 374 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ZNF132P52740 706 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 RAD23BP54727 409 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 TBX2Q13207 712 aaPredicted RBP17.05■□□□□ 0.32
ATG4D-205ENST00000586477 ASIC2Q16515 512 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 MEA1Q16626 185 aa17.05■□□□□ 0.32
ATG4D-205ENST00000586477 CCDC142Q17RM4 750 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms