RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 FAM84AQ96KN4 292 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 SYT15Q9BQS2 421 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 MTMR12Q9C0I1 747 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 TRPM5Q9NZQ8 1165 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 GCNT4Q9P109 453 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
CASC3-210ENST00000584997 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 SMC3Q9UQE7 1217 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
CASC3-210ENST00000584997 MYOFQ9NZM1 2061 aa11.13□□□□□ -0.63
CASC3-210ENST00000584997 CACNA1EQ15878 2313 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 MYMKA6NI61 221 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 K7EQS6 105 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 LEFTY2O00292 366 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 GABRDO14764 452 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 IDEP14735 1019 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 PFKLP17858 780 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 SPINK2P20155 84 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 CSRP1P21291 193 aaKnown RBP11.12□□□□□ -0.63
CASC3-210ENST00000584997 GRIK1P39086 918 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 TXLNAP40222 546 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 PSMC1P62191 440 aaKnown RBP11.12□□□□□ -0.63
CASC3-210ENST00000584997 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
CASC3-210ENST00000584997 CRY1Q16526 586 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 SOWAHAQ2M3V2 549 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
CASC3-210ENST00000584997 FAM171BQ6P995 826 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 VSTM1Q6UX27 236 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 DENND5BQ6ZUT9 1274 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 MYLPFQ96A32 169 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 STRA6Q9BX79 667 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 NUSAP1Q9BXS6 441 aaKnown RBP11.12□□□□□ -0.63
CASC3-210ENST00000584997 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 PDE11AQ9HCR9 933 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 BCCIPQ9P287 314 aaKnown RBP eCLIP11.12□□□□□ -0.63
CASC3-210ENST00000584997 SIX4Q9UIU6 781 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
CASC3-210ENST00000584997 PCNX2A6NKB5 2137 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 PKD1L2Q7Z442 2459 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 TMEM8BA6NDV4 472 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CDX4O14627 284 aaPredicted RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 TRIM66O15016 1216 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 MAP3K13O43283 966 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 ATP2C2O75185 946 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 KLF8O95600 359 aaPredicted RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 ABL1P00519 1130 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 APODP05090 189 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CYP17A1P05093 508 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 BDNFP23560 247 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 TIE1P35590 1138 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 IRX4P78413 519 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 LMAN2Q12907 356 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 ALCAMQ13740 583 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 TRIM61Q5EBN2 209 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 RRAGBQ5VZM2 374 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 ARMCX6Q7L4S7 300 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 LPCAT2Q7L5N7 544 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 DPH6Q7L8W6 267 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 FILIP1Q7Z7B0 1213 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 DEFB124Q8NES8 71 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 WHAMMQ8TF30 809 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 RLN3Q8WXF3 142 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CEP295NLQ96MC4 621 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 PCIF1Q9H4Z3 704 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 POLMQ9NP87 494 aaPredicted RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 OLFML3Q9NRN5 406 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 CPQQ9Y646 472 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 TNRC6BQ9UPQ9 1833 aaKnown RBP11.11□□□□□ -0.63
CASC3-210ENST00000584997 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
CASC3-210ENST00000584997 CEP192Q8TEP8 1941 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 ANTXRLA6NF34 631 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 SLC9A3R1O14745 358 aaPredicted RBP11.1□□□□□ -0.63
CASC3-210ENST00000584997 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
CASC3-210ENST00000584997 TNNC2P02585 160 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 LMO2P25791 158 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 MAPK8P45983 427 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 PPP3CCP48454 512 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 CASP5P51878 434 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 USP46P62068 366 aa11.1□□□□□ -0.63
CASC3-210ENST00000584997 SLC7A9P82251 487 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms