RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 CPT1BQ92523 772 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
TVP23C-210ENST00000584811 MCRS1Q96EZ8 462 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 MAML3Q96JK9 1138 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 PAIP2Q9BPZ3 127 aaKnown RBP16.53■□□□□ 0.24
TVP23C-210ENST00000584811 MIS12Q9H081 205 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 C12orf65Q9H3J6 166 aaKnown RBP16.53■□□□□ 0.24
TVP23C-210ENST00000584811 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 EURLQ9NYK6 297 aa16.53■□□□□ 0.24
TVP23C-210ENST00000584811 BARX2Q9UMQ3 279 aaPredicted RBP16.53■□□□□ 0.24
TVP23C-210ENST00000584811 RASA4BC9J798 803 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 RASA4O43374 803 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 PDGFRAP16234 1089 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 GPX6P59796 221 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 PKN2Q16513 984 aaKnown RBP16.52■□□□□ 0.24
TVP23C-210ENST00000584811 MICALCLQ6ZW33 695 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 SHCBP1Q8NEM2 672 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 OR6J1Q8NGC5 347 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 TMEM40Q8WWA1 233 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 ASB7Q9H672 318 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 DDX56Q9NY93 547 aaKnown RBP16.52■□□□□ 0.24
TVP23C-210ENST00000584811 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.24
TVP23C-210ENST00000584811 H0YHG0 523 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 MAGEB2O15479 319 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.23
TVP23C-210ENST00000584811 TRUB2O95900 331 aaKnown RBP16.52■□□□□ 0.23
TVP23C-210ENST00000584811 ITGAVP06756 1048 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 PDGFRBP09619 1106 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 CDH6P55285 790 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 TAP1Q03518 808 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 CA9Q16790 459 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 PPP1R2P3Q6NXS1 205 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 DRICH1Q6PGQ1 229 aaPredicted RBP16.52■□□□□ 0.23
TVP23C-210ENST00000584811 C1orf228Q6PIY5 440 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 SESTD1Q86VW0 696 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 C7orf31Q8N865 590 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 L3MBTL3Q96JM7 780 aaPredicted RBP16.52■□□□□ 0.23
TVP23C-210ENST00000584811 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.23
TVP23C-210ENST00000584811 A0A1W2PPM1 405 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 AVILO75366 819 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 ANKRD20A8PQ5CZ79 823 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 NUGGCQ68CJ6 796 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 NETO2Q8NC67 525 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 ZC3H15Q8WU90 426 aaKnown RBP16.51■□□□□ 0.23
TVP23C-210ENST00000584811 MAML1Q92585 1016 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 VTA1Q9NP79 307 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 ABCF3Q9NUQ8 709 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 CACNG4Q9UBN1 327 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 CLUHO75153 1309 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 COPS2P61201 443 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 TNFAIP2Q03169 654 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 ZNF268Q14587 947 aaPredicted RBP16.51■□□□□ 0.23
TVP23C-210ENST00000584811 HADHQ16836 314 aaKnown RBP16.51■□□□□ 0.23
TVP23C-210ENST00000584811 BBS12Q6ZW61 710 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 PIGWQ7Z7B1 504 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 CCT6BQ92526 530 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 RNF39Q9H2S5 420 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 NGRNQ9NPE2 291 aaKnown RBP16.51■□□□□ 0.23
TVP23C-210ENST00000584811 PNMA3Q9UL41 463 aa16.51■□□□□ 0.23
TVP23C-210ENST00000584811 DRG1Q9Y295 367 aaKnown RBP16.51■□□□□ 0.23
TVP23C-210ENST00000584811 CDH16O75309 829 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 KRT7P08729 469 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 RBP3P10745 1247 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 EIF3EP60228 445 aaKnown RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 BASP1P80723 227 aaKnown RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 ACVR2BQ13705 512 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 FAXCQ5TGI0 409 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 FAM47EQ6ZV65 393 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 IGDCC3Q8IVU1 814 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 NDRG1Q92597 394 aaKnown RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 STMN4Q9H169 189 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 PCDH9Q9HC56 1237 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 PLXNA1Q9UIW2 1896 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 RNF8O76064 485 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 VDRP11473 427 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 LMO2P25791 158 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 FOXN2P32314 431 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 WDR4P57081 412 aaKnown RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 CCNA1P78396 465 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 RBP5P82980 135 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 LMNB2Q03252 620 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 YTHDF3Q7Z739 585 aaKnown RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 CCDC197Q8NCU1 140 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 BBOF1Q8ND07 529 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 CMASQ8NFW8 434 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 RSAD2Q8WXG1 361 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 GRID1Q9ULK0 1009 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 HMGCRP04035 888 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 CCDC130P13994 396 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 PTPN7P35236 360 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 GABRB2P47870 512 aa16.5■□□□□ 0.23
TVP23C-210ENST00000584811 ACTN3Q08043 901 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-210ENST00000584811 CCDC14Q49A88 953 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms