RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-215	ENST00000583391	UBA3	Q8TBC4	463 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	EPS8L1	Q8TE68	723 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	SLC20A1	Q8WUM9	679 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	ZNF606	Q8WXB4	792 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	IQCD	Q96DY2	449 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	MRFAP1L1	Q96HT8	127 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	CORO1B	Q9BR76	489 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	DUSP16	Q9BY84	665 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	EDEM3	Q9BZQ6	932 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	S1PR5	Q9H228	398 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	MYO6	Q9UM54	1294 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	COG5	Q9UP83	839 aa		13.79	□□□□□ -0.2
ERBB2-215	ENST00000583391	SLC38A8	A6NNN8	435 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	TULP2	O00295	520 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	CFH	P08603	1231 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	POU2F2	P09086	479 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	TPM1	P09493	284 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	FER	P16591	822 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SLC5A3	P53794	718 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SLC8A3	P57103	927 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	NTHL1	P78549	312 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ITIH3	Q06033	890 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	PDE4C	Q08493	712 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	GOLGA8F	Q08AF8	430 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	GOLGA8DP	Q0D2H9	430 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SMAD4	Q13485	552 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	CNGA2	Q16280	664 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	TAF12	Q16514	161 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SFMBT2	Q5VUG0	894 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SMYD5	Q6GMV2	418 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	DENND1B	Q6P3S1	775 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	GPRIN1	Q7Z2K8	1008 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ITIH5	Q86UX2	942 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	HS6ST3	Q8IZP7	471 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ANKRD52	Q8NB46	1076 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ZNF397	Q8NF99	534 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	SECISBP2L	Q93073	1101 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	PSMG2	Q969U7	264 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	C8orf48	Q96LL4	319 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ZNF512	Q96ME7	567 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ADAM7	Q9H2U9	754 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	GRPEL1	Q9HAV7	217 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	CSNK1G1	Q9HCP0	422 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	ASAH2	Q9NR71	780 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	THEG	Q9P2T0	379 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	NOCT	Q9UK39	431 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	CAPN11	Q9UMQ6	739 aa		13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	LUC7L2	Q9Y383	392 aa	Known RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	USP15	Q9Y4E8	981 aa	Predicted RBP	13.78	□□□□□ -0.2
ERBB2-215	ENST00000583391	FAM170A	A1A519	330 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	GRXCR2	A6NFK2	248 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	CLUH	O75153	1309 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	PAPLN	O95428	1278 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	ADCY5	O95622	1261 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	SETSIP	P0DME0	302 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	CSH1	P0DML2	217 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	CSH2	P0DML3	217 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	MYL4	P12829	197 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	KRT9	P35527	623 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	RGS7	P49802	495 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	USP46	P62068	366 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	ZBED6	P86452	979 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	PABPC1L	Q4VXU2	614 aa	Known RBP	13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	DENND5B	Q6ZUT9	1274 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	FMNL3	Q8IVF7	1028 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	SPATA17	Q96L03	361 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	PDCL3	Q9H2J4	239 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	DNMT3B	Q9UBC3	853 aa	Known RBP	13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	ASB3	Q9Y575	518 aa		13.77	□□□□□ -0.21
ERBB2-215	ENST00000583391	HHLA1	C9JL84	531 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	XPO1	O14980	1071 aa	Known RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	MBTPS2	O43462	519 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	RHO	P08100	348 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	MME	P08473	750 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	CCDC172	P0C7W6	258 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PTPN2	P17706	415 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	MTHFR	P42898	656 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PLA2G4A	P47712	749 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	CDR2	Q01850	454 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	LEXM	Q3ZCV2	418 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PKDCC	Q504Y2	493 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	GET4	Q7L5D6	327 aa	Predicted RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PIGZ	Q86VD9	579 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	TMC8	Q8IU68	726 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	DRC7	Q8IY82	874 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	NUP93	Q8N1F7	819 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	C1orf131	Q8NDD1	294 aa	Known RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	SCAMP5	Q8TAC9	235 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	DDX1	Q92499	740 aa	Known RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	RIPOR3	Q96MK2	946 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PNPLA8	Q9NP80	782 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	SEPT11	Q9NVA2	429 aa	Known RBP	13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PCDHGC3	Q9UN70	934 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	CEP83	Q9Y592	693 aa		13.76	□□□□□ -0.21
ERBB2-215	ENST00000583391	PIK3R2	O00459	728 aa		13.75	□□□□□ -0.21
ERBB2-215	ENST00000583391	TNFRSF10B	O14763	440 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms