RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 NCLP19338 710 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 SLC11A2P49281 568 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 FHL1Q13642 323 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 CYP1B1Q16678 543 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 LY6KQ17RY6 165 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 BRDTQ58F21 947 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 TTBK1Q5TCY1 1321 aaPredicted RBP5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 WDR17Q8IZU2 1322 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 OSCP1Q8WVF1 389 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 HPS3Q969F9 1004 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 CHMP4CQ96CF2 233 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 MTFMTQ96DP5 389 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 MRGPRX1Q96LB2 322 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 MAP3K14Q99558 947 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 P2RX7Q99572 595 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 CIPCQ9C0C6 399 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 PCDH12Q9NPG4 1184 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 GABRQQ9UN88 632 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 TMX2Q9Y320 296 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 RAPGEF2Q9Y4G8 1499 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 FNDC1Q4ZHG4 1894 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 BIVM-ERCC5R4GMW8 1640 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 POC1B-GALNT4F8VUJ3 575 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 CYP2A6P11509 494 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 AKAP5P24588 427 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 NR4A2P43354 598 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 RENBPP51606 427 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 ALDH5A1P51649 535 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 GTF2H3Q13889 308 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 ZNF267Q14586 743 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 GALNT4Q8N4A0 578 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 ZC3H10Q96K80 434 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 SNX18Q96RF0 628 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 WACQ9BTA9 647 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 TRNAU1APQ9NX07 287 aaKnown RBP5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 MED16Q9Y2X0 877 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 SNX14Q9Y5W7 946 aa5.09□□□□□ -1.59
SMCHD1-208ENST00000583344 MAP3K1Q13233 1512 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 CADPSQ9ULU8 1353 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 E5RJQ4 531 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 AP4M1O00189 453 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 USP1O94782 785 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 PF4V1P10720 104 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 LRPAP1P30533 357 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 RAB1AP62820 205 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 E2F1Q01094 437 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 KRT17Q04695 432 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 LRRC41Q15345 812 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 TBC1D25Q3MII6 688 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 ZNF260Q3ZCT1 412 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 CERKLQ49MI3 558 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 RNASE12Q5GAN4 147 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 SERPINA13PQ6UXR4 307 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 CAND1Q86VP6 1230 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 ABRAQ8N0Z2 381 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 DPCDQ9BVM2 203 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 HOMER2Q9NSB8 354 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 IP6K2Q9UHH9 426 aa5.08□□□□□ -1.6
SMCHD1-208ENST00000583344 DLDP09622 509 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 SATB1Q01826 763 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 TRIP6Q15654 476 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 SLC15A4Q8N697 577 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 DNAJC5GQ8N7S2 189 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 PRSS3P2Q8NHM4 247 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 TMEM171Q8WVE6 324 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 HMCESQ96FZ2 354 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 PRR25Q96S07 402 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 MMS19Q96T76 1030 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 CNNM1Q9NRU3 951 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 SCAF8Q9UPN6 1271 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 AFG3L2Q9Y4W6 797 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 ARAP1Q96P48 1450 aa5.07□□□□□ -1.6
SMCHD1-208ENST00000583344 TCRBV5S1A1TA0A578 114 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 MYO1CO00159 1063 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 ADAM10O14672 748 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 CHRM5P08912 532 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 KCNA3P22001 575 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 ATP5F1P24539 256 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 IL1R2P27930 398 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 NEK2P51955 445 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 DGKEP52429 567 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 PSG6Q00889 435 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 ZNF268Q14587 947 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 IZUMO1Q8IYV9 350 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 NRACQ8N912 160 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 HOOK2Q96ED9 719 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 NUP88Q99567 741 aaPredicted RBP5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 EFHD1Q9BUP0 239 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 SLC12A5Q9H2X9 1139 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 ASIC5Q9NY37 505 aa5.06□□□□□ -1.6
SMCHD1-208ENST00000583344 NESP48681 1621 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 ANKRD62A6NC57 917 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 UBE2Q2LH0YL09 131 aa5.05□□□□□ -1.6
SMCHD1-208ENST00000583344 PRKCBP05771 671 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms