RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	HABP2	Q14520	560 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	PLS1	Q14651	629 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SYCP2L	Q5T4T6	812 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	EMC10	Q5UCC4	262 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	TMPRSS9	Q7Z410	1059 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	PPP1R3B	Q86XI6	285 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	DENND1C	Q8IV53	801 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SMC5	Q8IY18	1101 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	EXOC8	Q8IYI6	725 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	LNX2	Q8N448	690 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SH2D3C	Q8N5H7	860 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	CAMKK1	Q8N5S9	505 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	KLHDC4	Q8TBB5	520 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	BRIX1	Q8TDN6	353 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	MORC4	Q8TE76	937 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	TNPO1	Q92973	898 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	PTCD3	Q96EY7	689 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	LRGUK	Q96M69	825 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453		Q96MF0	132 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	TRIB1	Q96RU8	372 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	CGRRF1	Q99675	332 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SLAMF7	Q9NQ25	335 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	CASS4	Q9NQ75	786 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	INTS13	Q9NVM9	706 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	VSX1	Q9NZR4	365 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	DDX20	Q9UHI6	824 aa	Known RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SHPRH	Q149N8	1683 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	USP54	Q70EL1	1684 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	RTL1	A6NKG5	1358 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	PLEKHG2	Q9H7P9	1386 aa		3.89	□□□□□ -1.79
MSI2-215	ENST00000582453	SMG6	Q86US8	1419 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	NSD3	Q9BZ95	1437 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	MYOM1	P52179	1685 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	ALS2	Q96Q42	1657 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453		A0A088AWK7	358 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	TOR1B	O14657	336 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	FYB1	O15117	783 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	EIF3J	O75822	258 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	GNAI2	P04899	355 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SRGN	P10124	158 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	MPL	P40238	635 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	ZNF135	P52742	658 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	COL10A1	Q03692	680 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	FPGS	Q05932	587 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	FOXI1	Q12951	378 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	HDAC1	Q13547	482 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	HLX	Q14774	488 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PREPL	Q4J6C6	727 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	TAPT1	Q6NXT6	567 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453		Q6ZNX1	250 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	MICALCL	Q6ZW33	695 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	CHST15	Q7LFX5	561 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	ADGRG5	Q8IZF4	528 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SLC44A3	Q8N4M1	653 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PJA1	Q8NG27	643 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	POC1B	Q8TC44	478 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SSH3	Q8TE77	659 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SNX19	Q92543	992 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	TMEM125	Q96AQ2	219 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	LRIG1	Q96JA1	1093 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PSMD1	Q99460	953 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	TINAGL1	Q9GZM7	467 aa	Predicted RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	MYH16	Q9H6N6	1097 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PANK3	Q9H999	370 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SARS2	Q9NP81	518 aa	Known RBP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	KCTD5	Q9NXV2	234 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	ETAA1	Q9NY74	926 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PCDHA1	Q9Y5I3	950 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	SLIT2	O94813	1529 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	LRP6	O75581	1613 aa		3.88	□□□□□ -1.79
MSI2-215	ENST00000582453	PHLPP1	O60346	1717 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	MON2	Q7Z3U7	1717 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	NFAT5	O94916	1531 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453		A6NNZ2	444 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	PROM1	O43490	865 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	SOAT2	O75908	522 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	LMNA	P02545	664 aa	Known RBP	3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	AHSG	P02765	367 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	TYRP1	P17643	537 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	PHKA1	P46020	1223 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	INHBE	P58166	350 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	RAB1A	P62820	205 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	CD300E	Q496F6	205 aa	Predicted RBP	3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	CRB2	Q5IJ48	1285 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	GORAB	Q5T7V8	394 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	KSR2	Q6VAB6	950 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	PPP1R32	Q7Z5V6	425 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	USP37	Q86T82	979 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	ARHGEF25	Q86VW2	580 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	NSUN7	Q8NE18	718 aa	Known RBP	3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	PLBD2	Q8NHP8	589 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	COG3	Q96JB2	828 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	ACO2	Q99798	780 aa	Known RBP	3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	AIFM2	Q9BRQ8	373 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	RSAD1	Q9HA92	442 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	AGAP1	Q9UPQ3	857 aa		3.87	□□□□□ -1.79
MSI2-215	ENST00000582453	KNSTRN	Q9Y448	316 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms